Roger Larken Chang

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Bernhard PalssonUCSDVerified email at eng.ucsd.edu
Donghyuk KimAssociate Professor, School of Energy and Chemical Engineering, UNISTVerified email at unist.ac.kr
Nathan E LewisAssociate Professor, University of California, San DiegoVerified email at ucsd.edu
Jason PapinHarrison Distinguished Teaching Professor of Biomedical Engineering, University of VirginiaVerified email at virginia.edu
Lila GhamsariSapience TherapeuticsVerified email at sapiencetherapeutics.com
Kourosh Salehi-AshtianiNew York University Abu DhabiVerified email at nyu.edu
Joshua A. LermanDirector of Computation, Bota BiosciencesVerified email at bota.bio
Philip E. BourneUniversity of VirginiaVerified email at virginia.edu
Richard H. ScheuermannJ. Craig Venter InstituteVerified email at jcvi.org
Edward J. O'BrienSr. Scientist, Seres TherapeuticsVerified email at serestherapeutics.com
Ani ManichaikulAssociate Professor, Center for Public Health Genomics, University of VirginiaVerified email at virginia.edu
Pamela SilverProfessor of Systems Biology, Harvard Medical SchoolVerified email at hms.harvard.edu
Lei XieProfesssor, Hunter College, CUNY; Adjunct Professor, WCM, Cornell UniversityVerified email at hunter.cuny.edu
Feng LuoClemson UniversityVerified email at clemson.edu
Weiqi FuZhejiang University / University of IcelandVerified email at hi.is
Elizabeth BrunkAssistant Professor at UNC Chapel HillVerified email at med.unc.edu
Adam GodzikProfessor, University of California Riverside School of MedicineVerified email at medsch.ucr.edu
Zhanwen LiUniversity of California, ReversideVerified email at medsch.ucr.edu
Hojung NamAssociate Professor at Gwangju Institute of Science and Technology (GIST)Verified email at gist.ac.kr
Li Xieresearch scientist, UCSDVerified email at ucsd.edu

Roger Larken Chang

Assistant Professor, Albert Einstein College of Medicine

Verified email at einsteinmed.edu - Homepage

systems biology bioinformatics machine learning structural biology synthetic biology


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Genome‐scale models of metabolism and gene expression extend and refine growth phenotype prediction EJ O'brien, JA Lerman, RL Chang, DR Hyduke, BØ Palsson Molecular systems biology 9 (1), 693, 2013	428	2013
Metabolic network reconstruction of Chlamydomonas offers insight into light‐driven algal metabolism RL Chang, L Ghamsari, A Manichaikul, EFY Hom, S Balaji, W Fu, Y Shen, ... Molecular systems biology 7 (1), 518, 2011	331	2011
Network context and selection in the evolution to enzyme specificity H Nam, NE Lewis, JA Lerman, DH Lee, RL Chang, D Kim, BO Palsson Science 337 (6098), 1101-1104, 2012	272	2012
Drug off-target effects predicted using structural analysis in the context of a metabolic network model RL Chang, L Xie, L Xie, PE Bourne, BØ Palsson PLoS Comput Biol 6 (9), e1000938, 2010	224	2010
Modular organization of protein interaction networks F Luo, Y Yang, CF Chen, R Chang, J Zhou, RH Scheuermann Bioinformatics 23 (2), 207-214, 2007	211	2007
Download Links B Squires, C Macken, A Garcia-sastre, S Godbole, J Noronha, V Hunt, ...	138*
Structural systems biology evaluation of metabolic thermotolerance in Escherichia coli RL Chang, K Andrews, D Kim, Z Li, A Godzik, BO Palsson Science 340 (6137), 1220-1223, 2013	123	2013
Metabolic network analysis integrated with transcript verification for sequenced genomes A Manichaikul, L Ghamsari, EFY Hom, C Lin, RR Murray, RL Chang, ... Nature methods 6 (8), 589-592, 2009	105	2009
BioHealthBase: informatics support in the elucidation of influenza virus host–pathogen interactions and virulence B Squires, C Macken, A Garcia-Sastre, S Godbole, J Noronha, V Hunt, ... Nucleic acids research 36 (suppl_1), D497-D503, 2008	88	2008
Do genome‐scale models need exact solvers or clearer standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular systems biology 11 (10), 831, 2015	53	2015
Systems biology of the structural proteome E Brunk, N Mih, J Monk, Z Zhang, EJ O’Brien, SE Bliven, K Chen, ... BMC systems biology 10 (1), 1-16, 2016	51	2016
Transplantability of a circadian clock to a noncircadian organism AH Chen, D Lubkowicz, V Yeong, RL Chang, PA Silver Science advances 1 (5), e1500358, 2015	38	2015
Antibacterial mechanisms identified through structural systems pharmacology RL Chang, L Xie, PE Bourne, BO Palsson BMC systems biology 7 (1), 1-12, 2013	31	2013
Characterizing posttranslational modifications in prokaryotic metabolism using a multiscale workflow E Brunk, RL Chang, J Xia, H Hefzi, JT Yurkovich, D Kim, E Buckmiller, ... Proceedings of the National Academy of Sciences 115 (43), 11096-11101, 2018	29	2018
Streptomyces thermoautotrophicus does not fix nitrogen D MacKellar, L Lieber, JS Norman, A Bolger, C Tobin, JW Murray, ... Scientific reports 6 (1), 1-12, 2016	23	2016
Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation-induced damage RL Chang, JA Stanley, MC Robinson, JW Sher, Z Li, YA Chan, ... EMBO J, 2020	15	2020
Systems level analysis of the Chlamydomonas reinhardtii metabolic network reveals variability in evolutionary co-conservation A Chaiboonchoe, L Ghamsari, B Dohai, P Ng, B Khraiwesh, A Jaiswal, ... Molecular BioSystems 12 (8), 2394-2407, 2016	7	2016
Deterministic graph-theoretic algorithm for detecting modules in biological interaction networks RL Chang, F Luo, S Johnson, RH Scheuermann International journal of bioinformatics research and applications 6 (2), 101-119, 2010	5	2010
Engineering Radioprotective Human Cells Using the Tardigrade Damage Suppressor Protein, DSUP C Westover, D Najjar, C Meydan, K Grigorev, MT Veling, S Iosim, R Colon, ... bioRxiv, 2020	2	2020
Systemic post-translational control of bacterial metabolism regulates adaptation in dynamic environments E Brunk, RL Chang, J Xia, H Hefzi, JT Yurkovich, D Kim, E Buckmiller, ... Available at SSRN 3155551, 2018	2	2018

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