|User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability|
PA Yushkevich, J Piven, HC Hazlett, RG Smith, S Ho, JC Gee, G Gerig
Neuroimage 31 (3), 1116-1128, 2006
|N4ITK: improved N3 bias correction|
NJ Tustison, BB Avants, PA Cook, Y Zheng, A Egan, PA Yushkevich, ...
IEEE transactions on medical imaging 29 (6), 1310-1320, 2010
|Multi-atlas segmentation with joint label fusion|
H Wang, JW Suh, SR Das, JB Pluta, C Craige, PA Yushkevich
IEEE transactions on pattern analysis and machine intelligence 35 (3), 611-623, 2012
|Deformable registration of diffusion tensor MR images with explicit orientation optimization|
H Zhang, PA Yushkevich, DC Alexander, JC Gee
Medical image analysis 10 (5), 764-785, 2006
|The optimal template effect in hippocampus studies of diseased populations|
BB Avants, P Yushkevich, J Pluta, D Minkoff, M Korczykowski, J Detre, ...
Neuroimage 49 (3), 2457-2466, 2010
|Deformable m-reps for 3D medical image segmentation|
SM Pizer, PT Fletcher, S Joshi, A Thall, JZ Chen, Y Fridman, DS Fritsch, ...
International journal of computer vision 55 (2), 85-106, 2003
|Segmentation, registration, and measurement of shape variation via image object shape|
SM Pizer, DS Fritsch, PA Yushkevich, VE Johnson, EL Chaney
IEEE transactions on medical imaging 18 (10), 851-865, 1999
|Automated volumetry and regional thickness analysis of hippocampal subfields and medial temporal cortical structures in mild cognitive impairment|
PA Yushkevich, JB Pluta, H Wang, L Xie, SL Ding, EC Gertje, L Mancuso, ...
Human brain mapping 36 (1), 258-287, 2015
|Nearly automatic segmentation of hippocampal subfields in in vivo focal T2-weighted MRI|
PA Yushkevich, H Wang, J Pluta, SR Das, C Craige, BB Avants, ...
Neuroimage 53 (4), 1208-1224, 2010
|High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences: an example study using amyotrophic lateral sclerosis|
H Zhang, BB Avants, PA Yushkevich, JH Woo, S Wang, LF McCluskey, ...
IEEE transactions on medical imaging 26 (11), 1585-1597, 2007
|Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: towards a harmonized segmentation protocol|
PA Yushkevich, RSC Amaral, JC Augustinack, AR Bender, JD Bernstein, ...
Neuroimage 111, 526-541, 2015
|Multiscale deformable model segmentation and statistical shape analysis using medial descriptions|
S Joshi, S Pizer, PT Fletcher, P Yushkevich, A Thall, JS Marron
IEEE transactions on medical imaging 21 (5), 538-550, 2002
|A learning-based wrapper method to correct systematic errors in automatic image segmentation: consistently improved performance in hippocampus, cortex and brain segmentation|
H Wang, SR Das, JW Suh, M Altinay, J Pluta, C Craige, B Avants, ...
NeuroImage 55 (3), 968-985, 2011
|Structure-specific statistical mapping of white matter tracts|
PA Yushkevich, H Zhang, TJ Simon, JC Gee
Visualization and Processing of Tensor Fields, 83-112, 2009
|A high-resolution computational atlas of the human hippocampus from postmortem magnetic resonance imaging at 9.4 T|
PA Yushkevich, BB Avants, J Pluta, S Das, D Minkoff, ...
Neuroimage 44 (2), 385-398, 2009
|Multi-atlas segmentation with joint label fusion and corrective learning—an open source implementation|
H Wang, P Yushkevich
Frontiers in neuroinformatics 7, 27, 2013
|Continuous medial representation for anatomical structures|
PA Yushkevich, H Zhang, JC Gee
IEEE transactions on medical imaging 25 (12), 1547-1564, 2006
|Neuroinformatics for genome-wide 3-D gene expression mapping in the mouse brain|
L Ng, S Pathak, C Kuan, C Lau, H Dong, A Sodt, C Dang, B Avants, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (3), 382-393, 2007
|ITK-SNAP: an interactive tool for semi-automatic segmentation of multi-modality biomedical images|
PA Yushkevich, Y Gao, G Gerig
2016 38th Annual International Conference of the IEEE Engineering in …, 2016
|Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: an illustration in ADNI 3 T MRI data|
PA Yushkevich, BB Avants, SR Das, J Pluta, M Altinay, C Craige, ...
Neuroimage 50 (2), 434-445, 2010