Jose Miguel de la Rosa Trevin
Jose Miguel de la Rosa Trevin
SciLifeLab, Stockholm University
Verified email at scilifelab.se
Title
Cited by
Cited by
Year
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
JM De la Rosa-Trevín, A Quintana, L Del Cano, A Zaldívar, I Foche, ...
Journal of structural biology 195 (1), 93-99, 2016
2612016
Xmipp 3.0: an improved software suite for image processing in electron microscopy
JM De la Rosa-Trevín, J Otón, R Marabini, A Zaldivar, J Vargas, ...
Journal of structural biology 184 (2), 321-328, 2013
2072013
MonoRes: automatic and accurate estimation of local resolution for electron microscopy maps
JL Vilas, J Gómez-Blanco, P Conesa, R Melero, JM de la Rosa-Trevín, ...
Structure 26 (2), 337-344. e4, 2018
952018
Iterative elastic 3D-to-2D alignment method using normal modes for studying structural dynamics of large macromolecular complexes
Q Jin, COS Sorzano, JM De La Rosa-Trevín, JR Bilbao-Castro, ...
Structure 22 (3), 496-506, 2014
622014
A pattern matching approach to the automatic selection of particles from low-contrast electron micrographs
V Abrishami, A Zaldívar-Peraza, JM de la Rosa-Trevín, J Vargas, J Otón, ...
Bioinformatics 29 (19), 2460-2468, 2013
572013
A review of resolution measures and related aspects in 3D Electron Microscopy
COS Sorzano, J Vargas, J Otón, V Abrishami, JM De La Rosa-Trevin, ...
Progress in biophysics and molecular biology 124, 1-30, 2017
262017
FASTDEF: fast defocus and astigmatism estimation for high-throughput transmission electron microscopy
J Vargas, J Otón, R Marabini, S Jonic, JM De La Rosa-Trevín, JM Carazo, ...
Journal of structural biology 181 (2), 136-148, 2013
262013
Particle quality assessment and sorting for automatic and semiautomatic particle-picking techniques
J Vargas, V Abrishami, R Marabini, JM de la Rosa-Trevín, A Zaldivar, ...
Journal of structural biology 183 (3), 342-353, 2013
252013
Hybrid electron microscopy normal mode analysis graphical interface and protocol
COS Sorzano, JM de la Rosa-Trevín, F Tama, S Jonić
Journal of structural biology 188 (2), 134-141, 2014
232014
Fast and accurate conversion of atomic models into electron density maps
OSS Carlos, V Javier, O Joaquín, A Vahid, MRT José, FA Alejandro, ...
AIMS Biophysics 2 (1), 8-20, 2015
212015
A statistical approach to the initial volume problem in single particle analysis by electron microscopy
COS Sorzano, J Vargas, JM de la Rosa-Trevin, J Oton, ...
Journal of structural biology 189 (3), 213-219, 2015
202015
A new algorithm for high-resolution reconstruction of single particles by electron microscopy
COS Sorzano, J Vargas, JM de la Rosa-Trevín, A Jiménez, D Maluenda, ...
Journal of structural biology 204 (2), 329-337, 2018
162018
A survey of the use of iterative reconstruction algorithms in electron microscopy
COS Sorzano, J Vargas, J Otón, JM de la Rosa-Trevín, JL Vilas, ...
BioMed research international 2017, 2017
162017
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
CO Sorzano, JM de la Rosa Trevín, J Otón, JJ Vega, J Cuenca, ...
Nanoimaging, 171-193, 2013
142013
Using Scipion for stream image processing at Cryo-EM facilities
J Gómez-Blanco, JM de la Rosa-Trevín, R Marabini, L Del Cano, ...
Journal of structural biology 204 (3), 457-463, 2018
122018
Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data
V Abrishami, SL Ilca, J Gomez-Blanco, I Rissanen, JM de la Rosa-Trevín, ...
Progress in Biophysics and Molecular Biology 160, 43-52, 2021
112021
Cryo-EM and the elucidation of new macromolecular structures: random conical tilt revisited
COS Sorzano, M Alcorlo, JM De La Rosa-trevín, R Melero, I Foche, ...
Scientific reports 5 (1), 1-6, 2015
102015
Scipion web tools: Easy to use cryo‐EM image processing over the web
P Conesa Mingo, J Gutierrez, A Quintana, JM de la Rosa Trevín, ...
Protein Science 27 (1), 269-275, 2018
82018
ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds
J Cuenca-Alba, L Del Cano, JG Blanco, JM de la Rosa Trevín, PC Mingo, ...
Journal of structural biology 200 (1), 20-27, 2017
82017
Local analysis of strains and rotations for macromolecular electron microscopy maps
COS Sorzano, A Martín-Ramos, F Prieto, R Melero, J Martín-Benito, ...
Journal of structural biology 195 (1), 123-128, 2016
52016
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Articles 1–20