Anton Korobeynikov
Title
Cited by
Cited by
Year
Assembling genomes and mini-metagenomes from highly chimeric reads
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Research in computational molecular biology., 158–170, 2013
1406*2013
metaSPAdes: a new versatile metagenomic assembler
S Nurk, D Meleshko, A Korobeynikov, PA Pevzner
Genome research 27 (5), 824-834, 2017
12802017
Singular spectrum analysis with R
N Golyandina, A Korobeynikov, A Zhigljavsky
Springer Berlin Heidelberg, 2018
6542018
BayesHammer: Bayesian clustering for error correction in single-cell sequencing
SI Nikolenko, AI Korobeynikov, MA Alekseyev
BMC genomics 14 (1), 1-11, 2013
3772013
hybridSPAdes: an algorithm for hybrid assembly of short and long reads
D Antipov, A Korobeynikov, JS McLean, PA Pevzner
Bioinformatics 32 (7), 1009-1015, 2016
2982016
Basic singular spectrum analysis and forecasting with R
N Golyandina, A Korobeynikov
Computational Statistics & Data Analysis 71, 934-954, 2014
2012014
Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways
RC Coates, S Podell, A Korobeynikov, A Lapidus, P Pevzner, ...
PloS one 9 (1), e85140, 2014
1352014
Combining mass spectrometric metabolic profiling with genomic analysis: a powerful approach for discovering natural products from cyanobacteria
K Kleigrewe, J Almaliti, IY Tian, RB Kinnel, A Korobeynikov, EA Monroe, ...
Journal of natural products 78 (7), 1671-1682, 2015
1222015
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
1112020
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 1-12, 2018
1102018
Multivariate and 2D extensions of singular spectrum analysis with the Rssa package
N Golyandina, A Korobeynikov, A Shlemov, K Usevich
arXiv preprint arXiv:1309.5050, 2013
1082013
Computation-and space-efficient implementation of SSA
A Korobeynikov
arXiv preprint arXiv:0911.4498, 2009
1072009
ExSPAnder: a universal repeat resolver for DNA fragment assembly
AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ...
Bioinformatics 30 (12), i293-i301, 2014
882014
Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genus Moorea
T Leao, G Castelão, A Korobeynikov, EA Monroe, S Podell, E Glukhov, ...
Proceedings of the National Academy of Sciences 114 (12), 3198-3203, 2017
612017
Using SPAdes de novo assembler
A Prjibelski, D Antipov, D Meleshko, A Lapidus, A Korobeynikov
Current protocols in bioinformatics 70 (1), e102, 2020
592020
Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters
MA Schorn, MM Alanjary, K Aguinaldo, A Korobeynikov, S Podell, N Patin, ...
Microbiology 162 (12), 2075, 2016
492016
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
A Gurevich, A Mikheenko, A Shlemov, A Korobeynikov, H Mohimani, ...
Nature microbiology 3 (3), 319-327, 2018
482018
Single cell genome analysis of an uncultured heterotrophic stramenopile
RS Roy, DC Price, A Schliep, G Cai, A Korobeynikov, HS Yoon, EC Yang, ...
Scientific reports 4 (1), 1-8, 2014
442014
Spongosine Production by a Vibrio harveyi Strain Associated with the Sponge Tectitethya crypta
MJ Bertin, SL Schwartz, J Lee, A Korobeynikov, PC Dorrestein, L Gerwick, ...
Journal of natural products 78 (3), 493-499, 2015
412015
The phormidolide biosynthetic gene cluster: a trans-AT PKS pathway encoding a toxic macrocyclic polyketide
MJ Bertin, A Vulpanovici, EA Monroe, A Korobeynikov, DH Sherman, ...
Chembiochem: a European journal of chemical biology 17 (2), 164, 2016
372016
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Articles 1–20