Neema Jamshidi
Neema Jamshidi
Verified email at mednet.ucla.edu
Title
Cited by
Cited by
Year
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
19312005
Global reconstruction of the human metabolic network based on genomic and bibliomic data
NC Duarte, SA Becker, N Jamshidi, I Thiele, ML Mo, TD Vo, R Srivas, ...
Proceedings of the National Academy of Sciences 104 (6), 1777-1782, 2007
14432007
A community-driven global reconstruction of human metabolism
I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ...
Nature biotechnology 31 (5), 419-425, 2013
9782013
A community-driven global reconstruction of human metabolism
I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ...
Nature biotechnology 31 (5), 419-425, 2013
9782013
Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ 661 and proposing alternative drug targets
N Jamshidi, Bě Palsson
BMC systems biology 1 (1), 1-20, 2007
3242007
Xanthine oxidase activity associated with arterial blood pressure in spontaneously hypertensive rats
H Suzuki, FA DeLano, DA Parks, N Jamshidi, DN Granger, H Ishii, ...
Proceedings of the National Academy of Sciences 95 (8), 4754-4759, 1998
2871998
Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
A Bordbar, NE Lewis, J Schellenberger, Bě Palsson, N Jamshidi
Molecular systems biology 6 (1), 422, 2010
2562010
Genome-scale reconstruction of Escherichia coli's transcriptional and translational machinery: a knowledge base, its mathematical formulation, and its functional characterization
I Thiele, N Jamshidi, RMT Fleming, Bě Palsson
PLoS Comput Biol 5 (3), e1000312, 2009
2142009
Formulating genome‐scale kinetic models in the post‐genome era
N Jamshidi, Bě Palsson
Molecular systems biology 4 (1), 171, 2008
2082008
A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1
MI Sigurdsson, N Jamshidi, E Steingrimsson, I Thiele, Bě Palsson
BMC systems biology 4 (1), 1-13, 2010
1532010
Behind the numbers: decoding molecular phenotypes with radiogenomics—guiding principles and technical considerations
MD Kuo, N Jamshidi
Radiology 270 (2), 320-325, 2014
1512014
Dynamic simulation of the human red blood cell metabolic network
N Jamshidi, JS Edwards, T Fahland, GM Church, BO Palsson
Bioinformatics 17 (3), 286-287, 2001
1322001
Mass action stoichiometric simulation models: incorporating kinetics and regulation into stoichiometric models
N Jamshidi, Bě Palsson
Biophysical journal 98 (2), 175-185, 2010
1272010
Illuminating radiogenomic characteristics of glioblastoma multiforme through integration of MR imaging, messenger RNA expression, and DNA copy number variation
N Jamshidi, M Diehn, M Bredel, MD Kuo
Radiology 270 (1), 1-2, 2014
1242014
iAB-RBC-283: A proteomically derived knowledge-base of erythrocyte metabolism that can be used to simulate its physiological and patho-physiological states
A Bordbar, N Jamshidi, BO Palsson
BMC systems biology 5 (1), 1-12, 2011
952011
Breast cancer: radiogenomic biomarker reveals associations among dynamic contrast-enhanced MR imaging, long noncoding RNA, and metastasis
S Yamamoto, W Han, Y Kim, L Du, N Jamshidi, D Huang, JH Kim, MD Kuo
Radiology 275 (2), 384-392, 2015
932015
Microelectronic array devices and techniques for electric field enhanced DNA hybridization in low‐conductance buffers
C Gurtner, E Tu, N Jamshidi, RW Haigis, TJ Onofrey, CF Edman, ...
Electrophoresis 23 (10), 1543-1550, 2002
892002
Personalized whole-cell kinetic models of metabolism for discovery in genomics and pharmacodynamics
A Bordbar, D McCloskey, DC Zielinski, N Sonnenschein, N Jamshidi, ...
Cell systems 1 (4), 283-292, 2015
812015
Identification of potential pathway mediation targets in Toll-like receptor signaling
F Li, I Thiele, N Jamshidi, Bě Palsson
PLoS Comput Biol 5 (2), e1000292, 2009
792009
Identification of potential pathway mediation targets in Toll-like receptor signaling
F Li, I Thiele, N Jamshidi, Bě Palsson
PLoS Comput Biol 5 (2), e1000292, 2009
792009
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Articles 1–20