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Matt Kanke
Matt Kanke
Bioinformatics scientist - Amgen
Verified email at cornell.edu
Title
Cited by
Cited by
Year
Systemic HIV and SIV latency reversal via non-canonical NF-êB signalling in vivo
CC Nixon, M Mavigner, GC Sampey, AD Brooks, RA Spagnuolo, ...
Nature 578 (7793), 160-165, 2020
2352020
The long noncoding RNA CHROME regulates cholesterol homeostasis in primates
EJ Hennessy, C van Solingen, KR Scacalossi, M Ouimet, MS Afonso, ...
Nature metabolism 1 (1), 98-110, 2019
1122019
Identification of an anti-diabetic, orally available small molecule that regulates TXNIP expression and glucagon action
LA Thielen, J Chen, G Jing, O Moukha-Chafiq, G Xu, SH Jo, TB Grayson, ...
Cell metabolism 32 (3), 353-365. e8, 2020
692020
Multiomic profiling identifies cis-regulatory networks underlying human pancreatic â cell identity and function
N Lawlor, EJ Marquez, P Orchard, N Narisu, MS Shamim, A Thibodeau, ...
Cell reports 26 (3), 788-801. e6, 2019
692019
oskar RNA plays multiple noncoding roles to support oogenesis and maintain integrity of the germline/soma distinction
M Kanke, H Jambor, J Reich, B Marches, R Gstir, YH Ryu, A Ephrussi, ...
Rna 21 (6), 1096-1109, 2015
492015
miRquant 2.0: an expanded tool for accurate annotation and quantification of microRNAs and their isomiRs from small RNA-sequencing data
M Kanke, J Baran-Gale, J Villanueva, P Sethupathy
Journal of integrative bioinformatics 13 (5), 47-56, 2016
442016
Acute suppression of insulin resistance-associated hepatic miR-29 in vivo improves glycemic control in adult mice
YH Hung, M Kanke, CL Kurtz, R Cubitt, RP Bunaciu, J Miao, L Zhou, ...
Physiological genomics 51 (8), 379-389, 2019
422019
Circulating miRNAs associated with arsenic exposure
R Beck, P Bommarito, C Douillet, M Kanke, LM Del Razo, ...
Environmental science & technology 52 (24), 14487-14495, 2018
372018
Exploratory study reveals far reaching systemic and cellular effects of verapamil treatment in subjects with type 1 diabetes
G Xu, TD Grimes, TB Grayson, J Chen, LA Thielen, HM Tse, P Li, M Kanke, ...
Nature Communications 13 (1), 1159, 2022
362022
PGD2 and CRTH2 counteract Type 2 cytokine–elicited intestinal epithelial responses during helminth infection
OO Oyesola, MT Shanahan, M Kanke, BM Mooney, LM Webb, S Smita, ...
Journal of Experimental Medicine 218 (9), e20202178, 2021
362021
MicroRNA-375 suppresses the growth and invasion of fibrolamellar carcinoma
TA Dinh, ML Jewell, M Kanke, A Francisco, R Sritharan, RE Turnham, ...
Cellular and molecular gastroenterology and hepatology 7 (4), 803-817, 2019
342019
Cladocopium community divergence in two Acropora coral hosts across multiple spatial scales
SW Davies, KN Moreland, DC Wham, MR Kanke, MV Matz
Molecular Ecology 29 (23), 4559-4572, 2020
32*2020
MicroRNA-29 is an essential regulator of brain maturation through regulation of CH methylation
V Swahari, A Nakamura, E Hollville, H Stroud, JM Simon, TS Ptacek, ...
Cell reports 35 (1), 2021
262021
A thalamic orphan receptor drives variability in short-term memory
K Hsiao, C Noble, W Pitman, N Yadav, S Kumar, GR Keele, A Terceros, ...
Cell 183 (2), 522-536. e19, 2020
252020
Hotspots of aberrant enhancer activity in fibrolamellar carcinoma reveal candidate oncogenic pathways and therapeutic vulnerabilities
TA Dinh, R Sritharan, FD Smith, AB Francisco, RK Ma, RP Bunaciu, ...
Cell reports 31 (2), 2020
242020
microRNA-146a-5p association with the cardiometabolic disease risk factor TMAO
AR Coffey, M Kanke, TL Smallwood, J Albright, W Pitman, RZ Gharaibeh, ...
Physiological Genomics 51 (2), 59-71, 2019
232019
Single-cell analysis reveals unexpected cellular changes and transposon expression signatures in the colonic epithelium of treatment-naïve adult Crohn˘s disease patients
M Kanke, MMK Ng, S Connelly, M Singh, M Schaner, MT Shanahan, ...
Cellular and molecular gastroenterology and hepatology 13 (6), 1717-1740, 2022
21*2022
Arsenic is more potent than cadmium or manganese in disrupting the INS-1 beta cell microRNA landscape
R Beck, M Chandi, M Kanke, M Stýblo, P Sethupathy
Archives of toxicology 93, 3099-3109, 2019
212019
Colonic epithelial miR-31 associates with the development of Crohn˘s phenotypes
BP Keith, JB Barrow, T Toyonaga, N Kazgan, MH O˘Connor, ND Shah, ...
JCI insight 3 (19), 2018
212018
Predicted effects of observed changes in the mRNA and microRNA transcriptome of lung neutrophils during S. pneumoniae pneumonia in mice
JC Gomez, H Dang, M Kanke, RS Hagan, JR Mock, SNP Kelada, ...
Scientific Reports 7 (1), 11258, 2017
202017
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