| Guidelines for the use of flow cytometry and cell sorting in immunological studies A Cossarizza, HD Chang, A Radbruch, A Acs, D Adam, S Adam‐Klages, ... European journal of immunology 49 (10), 1457-1973, 2019 | 1716 | 2019 |
| Critical assessment of automated flow cytometry data analysis techniques N Aghaeepour, G Finak, FlowCAP Consortium, Dream Consortium, ... Nature methods 10 (3), 228-238, 2013 | 647 | 2013 |
| flowCore: a Bioconductor package for high throughput flow cytometry F Hahne, N LeMeur, RR Brinkman, B Ellis, P Haaland, D Sarkar, ... BMC bioinformatics 10, 1-8, 2009 | 509 | 2009 |
| MIFlowCyt: the minimum information about a Flow Cytometry Experiment JA Lee, J Spidlen, K Boyce, J Cai, N Crosbie, M Dalphin, J Furlong, ... Cytometry Part A: the journal of the International Society for Analytical …, 2008 | 468 | 2008 |
| Automated optimized parameters for T-distributed stochastic neighbor embedding improve visualization and analysis of large datasets AC Belkina, CO Ciccolella, R Anno, R Halpert, J Spidlen, ... Nature communications 10 (1), 5415, 2019 | 401 | 2019 |
| FlowRepository: A resource of annotated flow cytometry datasets associated with peer‐reviewed publications J Spidlen, K Breuer, C Rosenberg, N Kotecha, RR Brinkman Cytometry Part A 81 (9), 727-731, 2012 | 189 | 2012 |
| flowCore: Basic structures for flow cytometry data B Ellis, P Haaland, F Hahne, N Le Meur, N Gopalakrishnan, J Spidlen, ... R package version 1 (0), 2019 | 187 | 2019 |
| Flow cytometry bioinformatics K O'Neill, N Aghaeepour, J Špidlen, R Brinkman PLoS computational biology 9 (12), e1003365, 2013 | 134 | 2013 |
| Data file standard for flow cytometry, version FCS 3.1 J Spidlen, W Moore, D Parks, M Goldberg, C Bray, P Bierre, P Gorombey, ... Cytometry Part A: The Journal of the International Society for Advancement …, 2010 | 108 | 2010 |
| flow c lean: Automated identification and removal of fluorescence anomalies in flow cytometry data K Fletez‐Brant, J Špidlen, RR Brinkman, M Roederer, PK Chattopadhyay Cytometry Part A 89 (5), 461-471, 2016 | 60 | 2016 |
| Gating‐ML: XML‐based gating descriptions in flow cytometry J Spidlen, RC Leif, W Moore, M Roederer, RR Brinkman Cytometry Part A: The Journal of the International Society for Analytical …, 2008 | 47 | 2008 |
| Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) compliant manuscript using the International Society for Advancement of Cytometry (ISAC) FCS file … J Spidlen, K Breuer, R Brinkman Current protocols in cytometry 61 (1), 10.18. 1-10.18. 26, 2012 | 43 | 2012 |
| User interface of MUDR electronic health record P Hanzlicek, J Spidlen, H Heroutova, M Nagy International journal of medical informatics 74 (2-4), 221-227, 2005 | 39 | 2005 |
| Data standards for flow cytometry J Spidlen, RC Gentleman, PD Haaland, M Langille, NL Meur, MF Ochs, ... Omics: a journal of integrative biology 10 (2), 209-214, 2006 | 35 | 2006 |
| AutoSpill is a principled framework that simplifies the analysis of multichromatic flow cytometry data CP Roca, OT Burton, V Gergelits, T Prezzemolo, CE Whyte, R Halpert, ... Nature communications 12 (1), 2890, 2021 | 32 | 2021 |
| GenePattern flow cytometry suite J Spidlen, A Barsky, K Breuer, P Carr, MD Nazaire, BA Hill, Y Qian, ... Source code for biology and medicine 8, 1-8, 2013 | 25 | 2013 |
| Quailty Control of flow cytometry data through compositional data analysis C Fletez-Brant, J Spidlen, R Brinkman, M Roederer, P Chattopadhyay preparation, 0 | 21 | |
| Evaluating flow cytometer performance with weighted quadratic least squares analysis of L ED and multi‐level bead data DR Parks, F El Khettabi, E Chase, RA Hoffman, SP Perfetto, J Spidlen, ... Cytometry Part A 91 (3), 232-249, 2017 | 19 | 2017 |
| Flexible information storage in MUDRII EHR J Špidlen, P Hanzlíček, A Říha, J Zvárová International journal of medical informatics 75 (3-4), 201-208, 2006 | 19 | 2006 |
| ISAC's G ating‐ML 2.0 data exchange standard for gating description J Spidlen, W Moore, ISAC Data Standards Task Force, RR Brinkman Cytometry Part A 87 (7), 683-687, 2015 | 18 | 2015 |
Ryan BrinkmanBritish Columbia Cancer AgencyVerified email at bccrc.ca
