Udo Birk
Udo Birk
Institute for Photonics and ICT (IPI), University of Applied Sciences of the Grisons
Verified email at fhgr.ch - Homepage
Cited by
Cited by
Measurement of replication structures at the nanometer scale using super-resolution light microscopy
D Baddeley, VO Chagin, L Schermelleh, S Martin, A Pombo, PM Carlton, ...
Nucleic acids research 38 (2), e8-e8, 2010
High-precision structural analysis of subnuclear complexes in fixed and live cells via spatially modulated illumination (SMI) microscopy
J Reymann, D Baddeley, M Gunkel, P Lemmer, W Stadter, T Jegou, ...
Chromosome Research 16 (3), 367-382, 2008
Measuring the size of biological nanostructures with spatially modulated illumination microscopy
S Martin, AV Failla, U Spöri, C Cremer, A Pombo
Molecular biology of the cell 15 (5), 2449-2455, 2004
Nanosizing of fluorescent objects by spatially modulated illumination microscopy
AV Failla, U Spoeri, B Albrecht, A Kroll, C Cremer
Applied optics 41 (34), 7275-7283, 2002
Single molecule localization microscopy of the distribution of chromatin using Hoechst and DAPI fluorescent probes
AT Szczurek, K Prakash, HK Lee, DJ Żurek-Biesiada, G Best, M Hagmann, ...
Nucleus 5 (4), 331-340, 2014
Nano-sizing of specific gene domains in intact human cell nuclei by spatially modulated illumination light microscopy
G Hildenbrand, A Rapp, U Spöri, C Wagner, C Cremer, M Hausmann
Biophysical journal 88 (6), 4312-4318, 2005
Microscopic optical projection tomography in vivo
M Rieckher, UJ Birk, H Meyer, J Ripoll, N Tavernarakis
PLOS one 6 (4), e18963, 2011
Nanostructure analysis using spatially modulated illumination microscopy
D Baddeley, C Batram, Y Weiland, C Cremer, UJ Birk
Nature protocols 2 (10), 2640-2646, 2007
Superresolution imaging reveals structurally distinct periodic patterns of chromatin along pachytene chromosomes
K Prakash, D Fournier, S Redl, G Best, M Borsos, VK Tiwari, ...
Proceedings of the National Academy of Sciences 112 (47), 14635-14640, 2015
A transient ischemic environment induces reversible compaction of chromatin
I Kirmes, A Szczurek, K Prakash, I Charapitsa, C Heiser, M Musheev, ...
Genome biology 16 (1), 246, 2015
Correction for specimen movement and rotation errors for in-vivo Optical Projection Tomography
UJ Birk, M Rieckher, N Konstantinides, A Darrell, A Sarasa-Renedo, ...
Biomedical optics express 1 (1), 87-96, 2010
Combination of structured illumination and single molecule localization microscopy in one setup
S Rossberger, G Best, D Baddeley, R Heintzmann, U Birk, S Dithmar, ...
Journal of Optics 15 (9), 094003, 2013
Improved reconstructions and generalized filtered back projection for optical projection tomography
UJ Birk, A Darrell, N Konstantinides, A Sarasa-Renedo, J Ripoll
Applied optics 50 (4), 392-398, 2011
Imaging chromatin nanostructure with binding-activated localization microscopy based on DNA structure fluctuations
A Szczurek, L Klewes, J Xing, A Gourram, U Birk, H Knecht, JW Dobrucki, ...
Nucleic acids research 45 (8), e56-e56, 2017
Super-resolution microscopy approaches to nuclear nanostructure imaging
C Cremer, A Szczurek, F Schock, A Gourram, U Birk
Methods 123, 11-32, 2017
Localization microscopy of DNA in situ using Vybrant® DyeCycle™ Violet fluorescent probe: A new approach to study nuclear nanostructure at single molecule resolution
D Żurek-Biesiada, AT Szczurek, K Prakash, GK Mohana, HK Lee, ...
Experimental cell research 343 (2), 97-106, 2016
Nanostructure analysis using spatially modulated illumination microscopy
AV Failla, B Albrecht, U Spöri, A Schweitzer, A Kroll, G Hildenbrand, ...
ComPlexUs 1 (2), 77-88, 2003
Nanostructure of specific chromatin regions and nuclear complexes
H Mathée, D Baddeley, C Wotzlaw, J Fandrey, C Cremer, U Birk
Histochemistry and cell biology 125 (1-2), 75-82, 2006
Superresolution size determination in fluorescence microscopy: A comparison between spatially modulated illumination and confocal laser scanning microscopy
U Spöri, AV Failla, C Cremer
Journal of applied physics 95 (12), 8436-8443, 2004
Automated motion correction for in vivo optical projection tomography
S Zhu, D Dong, UJ Birk, M Rieckher, N Tavernarakis, X Qu, J Liang, J Tian, ...
IEEE transactions on medical imaging 31 (7), 1358-1371, 2012
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