Clement Jonquet

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	All	Since 2016
Citations	3014	1345
h-index	22	16
i10-index	47	28

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2004200520062007200820092010201120122013201420152016201720182019202020218 14 15 28 50 78 161 202 274 221 298 246 282 259 284 269 236 5

Co-authors

Mark MusenProfessor of Biomedical Informatics Research, Stanford UniversityVerified email at stanford.edu
Nigam ShahAssociate Professor of Medicine, Stanford UniversityVerified email at stanford.edu
Stefano A. CerriVicePres.R&D DKTS,Milano(I); Em.Prof. Informatics,Un.Montpellier(F); Dist.Fellow FBK,Trento(I)Verified email at didaelkts.it
Natasha NoyGoogle Inc.Verified email at acm.org
Maguelonne TeisseireIRSTEAVerified email at irstea.fr
Mathieu RocheCirad, TETISVerified email at cirad.fr
Juan Antonio Lossio-VenturaResearch Scientist, Stanford UniversityVerified email at stanford.edu
Trish WhetzelEMBL-EBIVerified email at ebi.ac.uk
Vincent EmonetData science developer, Institute of Data Science at Maastricht UniversityVerified email at maastrichtuniversity.nl
Pierre LarmandeIRD (Institute of Research for Development) - DIADE UnitVerified email at ird.fr
Margaret-Anne StoreyProfessor of Computer Science, University of VictoriaVerified email at uvic.ca
Anne TouletCIRAD (French Agricultural Research Centre for International Development)Verified email at cirad.fr
Adrien CouletInria Paris & Loria, NancyVerified email at inria.fr
Christopher G. ChuteBloomberg Distinguished Professor of Health Informatics, Johns HopkinsVerified email at jhu.edu
Elizabeth ArnaudBioversity InternationalVerified email at cgiar.org
Pascal DugenieCINESVerified email at dugenie.fr
Andon TchechmedjievAssociate Professor at IMT Mines AlèsVerified email at mines-ales.fr
John GraybealTechnical Program Manager, Stanford UniversityVerified email at stanford.edu
Amina AnnaneInstitut de recherche en informatique de Toulouse (IRIT)Verified email at irit.fr
Valeria PesceSemantic Web specialist and Data Scientist at the Food and Agriculture Organization of the UnitedVerified email at fao.org

Clement Jonquet

Associate Research Scientist – INRAE (MISTEA) & Associate Professor – Univ. of Montpellier (LIRMM)

Verified email at lirmm.fr - Homepage

Ontologies Semantic Web Semantic annotation Biomedical Informatics ontology repository


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BioPortal: ontologies and integrated data resources at the click of a mouse NF Noy, NH Shah, PL Whetzel, B Dai, M Dorf, N Griffith, C Jonquet, ... Nucleic acids research 37 (suppl_2), W170-W173, 2009	928	2009
The open biomedical annotator C Jonquet, NH Shah, MA Musen Summit on translational bioinformatics 2009, 56, 2009	296	2009
Comparison of concept recognizers for building the Open Biomedical Annotator NH Shah, N Bhatia, C Jonquet, D Rubin, AP Chiang, MA Musen BMC bioinformatics 10 (S9), S14, 2009	150	2009
Ontology-driven indexing of public datasets for translational bioinformatics NH Shah, C Jonquet, AP Chiang, AJ Butte, R Chen, MA Musen BMC bioinformatics 10 (S2), S1, 2009	137	2009
NCBO Resource Index: Ontology-based search and mining of biomedical resources C Jonquet, P LePendu, S Falconer, A Coulet, NF Noy, MA Musen, ... Journal of Web Semantics 9 (3), 316-324, 2011	124	2011
Building a biomedical ontology recommender web service C Jonquet, MA Musen, NH Shah Journal of biomedical semantics 1 (S1), S1, 2010	101	2010
NCBO annotator: semantic annotation of biomedical data C Jonquet, N Shah, C Youn, C Callendar, MA Storey, M Musen International Semantic Web Conference, Poster and Demo session 110, 2009	83	2009
AgroPortal: A vocabulary and ontology repository for agronomy C Jonquet, A Toulet, E Arnaud, S Aubin, ED Yeumo, V Emonet, ... Computers and Electronics in Agriculture 144, 126-143, 2018	71	2018
What four million mappings can tell you about two hundred ontologies A Ghazvinian, NF Noy, C Jonquet, N Shah, MA Musen International Semantic Web Conference, 229-242, 2009	70	2009
Biomedical term extraction: overview and a new methodology JA Lossio-Ventura, C Jonquet, M Roche, M Teisseire Information Retrieval Journal 19 (1-2), 59-99, 2016	67	2016
A system for ontology-based annotation of biomedical data C Jonquet, MA Musen, N Shah International Workshop on Data Integration in The Life Sciences, 144-152, 2008	60	2008
BioPortal: ontologies and data resources with the click of a mouse M Musen, N Shah, N Noy, B Dai, M Dorf, N Griffith, JD Buntrock, ... AMIA Annu Symp Proc 6, 1223-1224, 2008	50	2008
NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation M Martínez-Romero, C Jonquet, MJ O’connor, J Graybeal, A Pazos, ... Journal of biomedical semantics 8 (1), 21, 2017	42	2017
Yet another ranking function for automatic multiword term extraction JA Lossio-Ventura, C Jonquet, M Roche, M Teisseire International Conference on Natural Language Processing, 52-64, 2014	41	2014
Combining c-value and keyword extraction methods for biomedical terms extraction JA Lossio-Ventura, C Jonquet, M Roche, M Teisseire LBM: Languages in Biology and Medicine, 2013	35	2013
BIOTEX: A system for biomedical terminology extraction, ranking, and validation JA Lossio-Ventura, C Jonquet, M Roche, M Teisseire ISWC: International Semantic Web Conference, 2014	33	2014
The Grid Shared Desktop: a bootstrapping environment for collaboration P Dugénie, P Lemoisson, C Jonquet, M Crubézy, C Laurenco Advanced Technology for Learning 3 (4), 241-249, 2006	29	2006
The strobe model: Dynamic service generation on the grid C Jonquet, S Cerri Applied Artificial Intelligence 19 (9-10), 967-1013, 2005	27	2005
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ... Database 2018, 2018	24	2018
Towards a mixed approach to extract biomedical terms from text corpus JAL Ventura, C Jonquet, M Roche, M Teisseire International Journal of Knowledge Discovery in Bioinformatics (IJKDB) 4 (1 …, 2014	24	2014

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