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Matthias Bussonnier
Matthias Bussonnier
Verified email at berkeley.edu
Title
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Cited by
Year
Jupyter Notebooks-a publishing format for reproducible computational workflows.
T Kluyver, B Ragan-Kelley, F Pérez, BE Granger, M Bussonnier, ...
Elpub 2016, 87-90, 2016
3217*2016
Jupyter notebooks
T Kluyver, B Ragan-Kelley, F Pérez, BE Granger, M Bussonnier, ...
a publishing format for reproducible computational workflows 2016, 87-90, 2016
20172016
Binder 2.0-Reproducible, interactive, sharable environments for science at scale
P Jupyter, M Bussonnier, J Forde, J Freeman, B Granger, T Head, ...
SciPy, 2018
180*2018
Active diffusion positions the nucleus in mouse oocytes
M Almonacid, WW Ahmed, M Bussonnier, P Mailly, T Betz, R Voituriez, ...
Nature cell biology 17 (4), 470-479, 2015
1562015
The Jupyter/IPython architecture: a unified view of computational research, from interactive exploration to communication and publication.
M Ragan-Kelley, F Perez, B Granger, T Kluyver, P Ivanov, J Frederic, ...
AGU, 2014
1522014
napari: a multi-dimensional image viewer for Python
N Sofroniew, T Lambert, K Evans, J Nunez-Iglesias, G Bokota, P Winston, ...
Zenodo, 2022
862022
Active mechanics reveal molecular-scale force kinetics in living oocytes
WW Ahmed, É Fodor, M Almonacid, M Bussonnier, MH Verlhac, N Gov, ...
Biophysical journal 114 (7), 1667-1679, 2018
762018
Jupyter development team
T Kluyver, B Ragan-Kelley, F Pérez, B Granger, M Bussonnier, J Frederic, ...
Jupyter Notebooks Publ format Reprod Comput Work ELPUB 2016, 87-90, 2016
652016
Nonequilibrium dissipation in living oocytes
É Fodor, WW Ahmed, M Almonacid, M Bussonnier, NS Gov, MH Verlhac, ...
Europhysics Letters 116 (3), 30008, 2016
602016
napari/napari: 0.4. 12rc2
N Sofroniew, T Lambert, K Evans, J Nunez-Iglesias, G Bokota, ...
Zenodo https://doi. org/10.5281/zenodo 5586292, 2021
462021
nbgrader: A tool for creating and grading assignments in the Jupyter Notebook
DS Blank, D Bourgin, A Brown, M Bussonnier, J Frederic, B Granger, ...
The Journal of Open Source Education 2 (11), 2019
432019
Doncila Pop
N Sofroniew, T Lambert, K Evans, J Nunez-Iglesias, G Bokota, P Winston, ...
D., et al, 2022
292022
& Ivanov, P.(2016, May). Jupyter Notebooks
T Kluyver, B Ragan-Kelley, F Pérez, BE Granger, M Bussonnier, ...
a publishing format for reproducible computational workflows. In ELPUB, 0
22
Cell-sized liposome doublets reveal active tension build-up driven by acto-myosin dynamics
V Caorsi, J Lemière, C Campillo, M Bussonnier, J Manzi, T Betz, ...
Soft Matter 12 (29), 6223-6231, 2016
212016
Quantification of collagen contraction in three-dimensional cell culture
KS Kopanska, M Bussonnier, S Geraldo, A Simon, D Vignjevic, T Betz
Methods in cell biology 125, 353-372, 2015
212015
napari: a multi-dimensional image viewer for Python
J Ahlers, DA Moré, O Amsalem, A Anderson, G Bokota, P Boone, ...
Zenodo https://doi. org/10.5281/zenodo 8115575, 2023
162023
Mechanical detection of a long-range actin network emanating from a biomimetic cortex
M Bussonnier, K Carvalho, J Lemière, JF Joanny, C Sykes, T Betz
Biophysical journal 107 (4), 854-862, 2014
162014
Doncila Pop, D., et al.(2022). napari: a multi-dimensional image viewer for Python
N Sofroniew, T Lambert, K Evans, J Nunez-Iglesias, G Bokota, P Winston, ...
Zenodo https://doi. org/10.5281/ZENODO 6598542, 0
10
Reproducing machine learning research on binder
J Forde, M Bussonnier, FA Fortin, B Granger, T Head, C Holdgraf, ...
72018
Interactive parallel computing in Python
M Bussonnier
52015
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Articles 1–20