Dr Dimitrios Vlachakis

Cited by

	All	Since 2015
Citations	1225	964
h-index	20	17
i10-index	46	39

360

180

270

2009201020112012201320142015201620172018201920204 14 18 31 75 114 75 101 144 130 157 354

Co-authors

S KossidaProfessor of BioinformaticsVerified email at igh.cnrs.fr
Louis PapageorgiouAgricultural University of Athens, Department of Biotechnology & Biomedical Research FoundationVerified email at bioacademy.gr
Vasileios MegalooikonomouProfessor of Computer Engineering and Informatics, University of PatrasVerified email at ceid.upatras.gr
Nicolas C. NicolaidesPost-Doctoral Research Fellow, Biomedical Research Foundation of the Academy of AthensVerified email at bioacademy.gr
Evangelia CharmandariProfessor of Pediatric and Adolescent Endocrinology, National and Kapodistrian University of AthensVerified email at med.uoa.gr
Spyridon Champeris TsanirasPostdoctoral Fellow at Cold Spring Harbor Laboratory; Editor-In-Chief of Journal of MolecularVerified email at cshl.edu
George P. ChrousosProfessor, School of Medicine, National and Kapodistrian University of AthensVerified email at med.uoa.gr
AMALIA SERTEDAKINATIONAL AND KAPODISTRIAN UNIVERSITY, MEDICAL SCHOOLVerified email at med.uoa.gr
Andrea BrancaleCardiff UniversityVerified email at cardiff.ac.uk
Nikolaos LabrouProfessor Agricultural University of athensVerified email at aua.gr
Elena BencurovaUniversity of WürzburgVerified email at uvm.sk
Constantinos StathopoulosProfessor, University of Patras School of MedicineVerified email at med.upatras.gr
Dimitri KomiotisProfessor of Bioorganic Chemistry, University of Thessaly, GreeceVerified email at bio.uth.gr
Paraskevas FakourelisVerified email at ceid.upatras.gr
Johan NeytsVerified email at rega.kuleuven.be
E PapakonstantinouAgricultural University of AthensVerified email at aua.gr
Evangelia I. ZacharakiVVR Group, Electrical and Computer Engineering, University of Patras, GreeceVerified email at upatras.gr
Vassiliki Lila KoumandouLecturer in Genetics, Biotechnology Department, Agricultural University of AthensVerified email at aua.gr
Flora BacopoulouFirst Department of Pediatrics, Athens University Medical SchoolVerified email at med.uoa.gr
Nikos ParagiosProfessor, CentraleSupelec (Ecole Centrale Paris) / Université Paris-Saclay / InriaVerified email at ecp.fr

Dr Dimitrios Vlachakis

Assistant Professor, Genetics Laboratory, Department of Biotechnology

Verified email at aua.gr - Homepage

Agricultural University of Athens


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Current state-of-the-art molecular dynamics methods and applications D Vlachakis, E Bencurova, N Papangelopoulos, S Kossida Advances in protein chemistry and structural biology 94, 269-313, 2014	54	2014
Discovery of a novel HCV helicase inhibitor by a de novo drug design approach S Kandil, S Biondaro, D Vlachakis, AC Cummins, A Coluccia, C Berry, ... Bioorganic & medicinal chemistry letters 19 (11), 2935-2937, 2009	54	2009
Competitive inhibition of human poly (A)-specific ribonuclease (PARN) by synthetic fluoro-pyranosyl nucleosides NAA Balatsos, D Vlachakis, P Maragozidis, S Manta, D Anastasakis, ... Biochemistry 48 (26), 6044-6051, 2009	53	2009
State-of-the-art technology in modern computer-aided drug design GA Dalkas, D Vlachakis, D Tsagkrasoulis, A Kastania, S Kossida Briefings in bioinformatics 14 (6), 745-752, 2013	42	2013
A novel point mutation of the human glucocorticoid receptor gene causes primary generalized glucocorticoid resistance through impaired interaction with the LXXLL motif of the … NC Nicolaides, ML Roberts, T Kino, G Braatvedt, DE Hurt, E Katsantoni, ... The Journal of Clinical Endocrinology & Metabolism 99 (5), E902-E907, 2014	38	2014
Gromita: a fully integrated graphical user interface to gromacs 4 D Sellis, D Vlachakis, M Vlassi Bioinformatics and biology insights 3, BBI. S3207, 2009	37	2009
EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation A Amidi, S Amidi, D Vlachakis, V Megalooikonomou, N Paragios, ... PeerJ 6, e4750, 2018	33	2018
A holistic evolutionary and structural study of flaviviridae provides insights into the function and inhibition of HCV helicase D Vlachakis, VL Koumandou, S Kossida PeerJ 1, e74, 2013	31	2013
Introducing Drugster: a comprehensive and fully integrated drug design, lead and structure optimization toolkit D Vlachakis, D Tsagrasoulis, V Megalooikonomou, S Kossida Bioinformatics 29 (1), 126-128, 2013	30	2013
Phosphorylation of the arginine/serine repeats of lamin B receptor by SRPK1—Insights from molecular dynamics simulations D Sellis, V Drosou, D Vlachakis, N Voukkalis, T Giannakouros, M Vlassi Biochimica et Biophysica Acta (BBA)-General Subjects 1820 (1), 44-55, 2012	30	2012
Antiviral stratagems against HIV-1 using RNA interference (RNAi) technology D Vlachakis, G Tsiliki, A Pavlopoulou, MG Roubelakis, SC Tsaniras, ... Evolutionary Bioinformatics 9, EBO. S11412, 2013	27	2013
Modelling and mutational evidence identify the substrate binding site and functional elements in APC amino acid transporters I Vangelatos, D Vlachakis, V Sophianopoulou, G Diallinas Molecular membrane biology 26 (5-7), 356-370, 2009	27	2009
Antibody drug conjugate bioinformatics: drug delivery through the letterbox D Vlachakis, S Kossida Computational and mathematical methods in medicine 2013, 2013	25	2013
Functional toll-like receptor 9 expression and CXCR3 ligand release in pulmonary sarcoidosis J Schnerch, A Prasse, D Vlachakis, KL Schuchardt, DV Pechkovsky, ... American journal of respiratory cell and molecular biology 55 (5), 749-757, 2016	24	2016
A novel mutation of the hGR gene causing Chrousos syndrome NC Nicolaides, EB Geer, D Vlachakis, ML Roberts, AMG Psarra, ... European journal of clinical investigation 45 (8), 782-791, 2015	24	2015
Directed evolution of Tau class glutathione transferases reveals a site that regulates catalytic efficiency and masks co-operativity I Axarli, AW Muleta, D Vlachakis, S Kossida, G Kotzia, A Maltezos, ... Biochemical Journal 473 (5), 559-570, 2016	23	2016
Molecular dynamics simulations through GPU video games technologies S Loukatou, L Papageorgiou, P Fakourelis, A Filntisi, E Polychronidou, ... Journal of Molecular Biochemistry 3 (2), 64, 2014	23	2014
Theoretical study of the Usutu virus helicase 3D structure, by means of computer-aided homology modelling D Vlachakis Theoretical Biology and Medical Modelling 6 (1), 9, 2009	23	2009
Recent advances in the molecular mechanisms causing primary generalized glucocorticoid resistance NC Nicolaides, A Lamprokostopoulou, A Sertedaki, E Charmandari Hormones 15 (1), 23-34, 2016	21	2016
Genomic big data hitting the storage bottleneck L Papageorgiou, P Eleni, S Raftopoulou, M Mantaiou, ... EMBnet. journal 24, 2018	20	2018

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