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Dmitri  N. Ermolenko
Dmitri N. Ermolenko
Verified email at urmc.rochester.edu - Homepage
Title
Cited by
Cited by
Year
Spontaneous intersubunit rotation in single ribosomes
PV Cornish, DN Ermolenko, HF Noller, T Ha
Molecular cell 30 (5), 578-588, 2008
4252008
Bacterial cold-shock proteins
DN Ermolenko, GI Makhatadze
Cellular and Molecular Life Sciences CMLS 59, 1902-1913, 2002
3272002
Contribution of surface salt bridges to protein stability: guidelines for protein engineering
GI Makhatadze, VV Loladze, DN Ermolenko, XF Chen, ST Thomas
Journal of molecular biology 327 (5), 1135-1148, 2003
2822003
Observation of intersubunit movement of the ribosome in solution using FRET
DN Ermolenko, ZK Majumdar, RP Hickerson, PC Spiegel, RM Clegg, ...
Journal of molecular biology 370 (3), 530-540, 2007
2332007
Following movement of the L1 stalk between three functional states in single ribosomes
PV Cornish, DN Ermolenko, DW Staple, L Hoang, RP Hickerson, ...
Proceedings of the National Academy of Sciences 106 (8), 2571-2576, 2009
2102009
A post-translational regulatory switch on UPF1 controls targeted mRNA degradation
T Kurosaki, W Li, M Hoque, MWL Popp, DN Ermolenko, B Tian, ...
Genes & development 28 (17), 1900-1916, 2014
1772014
Structural dynamics of the ribosome
A Korostelev, DN Ermolenko, HF Noller
Current opinion in chemical biology 12 (6), 674-683, 2008
1772008
Naked mole-rat has increased translational fidelity compared with the mouse, as well as a unique 28S ribosomal RNA cleavage
J Azpurua, Z Ke, IX Chen, Q Zhang, DN Ermolenko, ZD Zhang, ...
Proceedings of the National Academy of Sciences 110 (43), 17350-17355, 2013
1752013
Heat capacity changes upon burial of polar and nonpolar groups in proteins
VV Loladze, DN Ermolenko, GI Makhatadze
Protein Science 10 (7), 1343-1352, 2001
1682001
The antibiotic viomycin traps the ribosome in an intermediate state of translocation
DN Ermolenko, PC Spiegel, ZK Majumdar, RP Hickerson, RM Clegg, ...
Nature structural & molecular biology 14 (6), 493-497, 2007
1632007
Elongation factor G stabilizes the hybrid-state conformation of the 70S ribosome
PC Spiegel, DN Ermolenko, HF Noller
Rna 13 (9), 1473-1482, 2007
1492007
mRNA translocation occurs during the second step of ribosomal intersubunit rotation
DN Ermolenko, HF Noller
Nature structural & molecular biology 18 (4), 457-462, 2011
1452011
Structure of the ribosome with elongation factor G trapped in the pretranslocation state
AF Brilot, AA Korostelev, DN Ermolenko, N Grigorieff
Proceedings of the National Academy of Sciences 110 (52), 20994-20999, 2013
1442013
Thermodynamic consequences of burial of polar and non-polar amino acid residues in the protein interior
VV Loladze, DN Ermolenko, GI Makhatadze
Journal of molecular biology 320 (2), 343-357, 2002
1432002
Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome
E Svidritskiy, C Ling, DN Ermolenko, AA Korostelev
Proceedings of the National Academy of Sciences 110 (30), 12283-12288, 2013
1142013
Structural insights into ribosome translocation
C Ling, DN Ermolenko
Wiley Interdisciplinary Reviews: RNA 7 (5), 620-636, 2016
782016
mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances
WJC Lai, M Kayedkhordeh, EV Cornell, E Farah, S Bellaousov, ...
Nature communications 9 (1), 4328, 2018
742018
An extended U2AF65–RNA-binding domain recognizes the 3′ splice site signal
AA Agrawal, E Salsi, R Chatrikhi, S Henderson, JL Jenkins, MR Green, ...
Nature communications 7 (1), 10950, 2016
682016
mRNA stem-loops can pause the ribosome by hindering A-site tRNA binding
C Bao, S Loerch, C Ling, AA Korostelev, N Grigorieff, DN Ermolenko
Elife 9, e55799, 2020
532020
Hydrophobic Interactions at the Ccap Position of the C-capping Motif of α-Helices
DN Ermolenko, ST Thomas, R Aurora, AM Gronenborn, GI Makhatadze
Journal of molecular biology 322 (1), 123-135, 2002
502002
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