Jochen Supper
Jochen Supper
Unknown affiliation
Verified email at supper.de
Title
Cited by
Cited by
Year
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
CA Brownstein, AH Beggs, N Homer, B Merriman, WY Timothy, ...
Genome biology 15 (3), 1-18, 2014
942014
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies
A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ...
BMC Systems Biology 3 (1), 1-24, 2009
872009
TDP-43 regulates global translational yield by splicing of exon junction complex component SKAR
FC Fiesel, SS Weber, J Supper, A Zell, PJ Kahle
Nucleic acids research 40 (6), 2668-2682, 2012
792012
EDISA: extracting biclusters from multiple time-series of gene expression profiles
J Supper, M Strauch, D Wanke, K Harter, A Zell
BMC bioinformatics 8 (1), 1-14, 2007
782007
SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks
A Dräger, N Hassis, J Supper, A Schröder, A Zell
BMC systems biology 2 (1), 1-7, 2008
742008
BowTieBuilder: modeling signal transduction pathways
J Supper, L Spangenberg, H Planatscher, A Dräger, A Schröder, A Zell
BMC systems biology 3 (1), 1-13, 2009
432009
Fast outdoor robot localization using integral invariants
C Weiss, A Masselli, H Tamimi, A Zell
International Conference on Computer Vision Systems: Proceedings (2007), 2007
282007
Feedback memetic algorithms for modeling gene regulatory networks
C Spieth, F Streichert, J Supper, N Speer, A Zell
2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005
262005
Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry
H Planatscher, J Supper, O Poetz, D Stoll, T Joos, MF Templin, A Zell
Algorithms for Molecular Biology 5 (1), 1-9, 2010
192010
Detecting and visualizing gene fusions
J Supper, C Gugenmus, J Wollnik, T Drueke, M Scherf, A Hahn, K Grote, ...
Methods 59 (1), S24-S28, 2013
182013
Predicting DNA-binding specificities of eukaryotic transcription factors
A Schröder, J Eichner, J Supper, J Eichner, D Wanke, C Henneges, A Zell
PloS one 5 (11), e13876, 2010
162010
JCell—a Java-based framework for inferring regulatory networks from time series data
C Spieth, J Supper, F Streichert, N Speer, A Zell
Bioinformatics 22 (16), 2051-2052, 2006
162006
A two-step clustering for 3-D gene expression data reveals the main features of the Arabidopsis stress response
M Strauch, J Supper, C Spieth, D Wanke, J Kilian, K Harter, A Zell
Journal of Integrative Bioinformatics 4 (1), 81-93, 2007
122007
Inferring gene regulatory networks by machine learning methods
J Supper, H Fröhlich, C Spieth, A Dräger, A Zell
Proceedings of the 5th Asia-Pacific Bioinformatics Conference, 247-256, 2007
92007
Benchmarking Evolutionary Algorithms on Convenience Kinetics Models of the Valine and Leucine Biosynthesis in C. glutamicum
A Drager, M Kronfeld, J Supper, H Planatscher, JB Magnus, M Oldiges, ...
2007 IEEE Congress on Evolutionary Computation, 896-903, 2007
82007
Reconstructing linear gene regulatory networks
J Supper, C Spieth, A Zell
European Conference on Evolutionary Computation, Machine Learning and Data …, 2007
82007
Comparing Various Evolutionary Algorithms on the Parameter Optimization of the Valine and Leucine Biosynthesis in Corynebacterium glutamicum
A Drager, J Supper, H Planatscher, JB Magnus, M Oldiges, A Zell
2007 IEEE Congress on Evolutionary Computation, 620-627, 2007
72007
Integrating biological perspectives: A quantum leap for microarray expression analysis
D Wanke, J Kilian, U Bloss, E Mangelsen, J Supper, K Harter, ...
Quantum Bio-Informatics II: From Quantum Information to Bio-Informatics, 327-344, 2009
42009
The Analysis of Gene Expression and Cis-Regulatory Elements in Large Microarray Expression Datasets
D Wanke, J Kilian, J Supper, KW Berendzen, A Zell, K Harter
Quantum Bio-Informatics: From Quantum Information to Bio-Informatics, 294-314, 2008
32008
Reverse Engineering Non-Linear Gene Regulatory Networks Based on the Bacteriophage λ cI Circuit
J Supper, C Spieth, A Zell
2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005
32005
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Articles 1–20