Christopher J Mungall

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Suzanna LewisLawrence Berkeley National LaboratoryVerified email at lbl.gov
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Peter RobinsonProfessor of Computational Biology, The Jackson Laboratory for Genomic MedicineVerified email at jax.org
Sebastian KöhlerSenior Information Architect, Ada Health; Member of Monarch InitiativeVerified email at ada.com
Alan RuttenbergDirector of Clinical and Translational Data Exchange, School of Dental Medicine, University at BuffaloVerified email at buffalo.edu
Seth CarbonLawrence Berkeley National LaboratoryVerified email at lbl.gov
Amelia IrelandUnaffiliatedVerified email at gmod.org
Damian SmedleyQueen Mary University of LondonVerified email at qmul.ac.uk
Nicole L WashingtonHelixVerified email at helix.com
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Verified email at oicr.on.ca
Jane LomaxSciBiteVerified email at scibite.com
Judith BlakeProfessor of Mammalian GeneticsVerified email at jax.org
Karen EilbeckProfessor, Biomedical Informatics, University of UtahVerified email at genetics.utah.edu
Pankaj JaiswalProfessor, Oregon State UniversityVerified email at science.oregonstate.edu
Richard H. ScheuermannJ. Craig Venter InstituteVerified email at jcvi.org
Gerald M. RubinJanelia Research Campus/HHMIVerified email at janelia.hhmi.org
Fabian NeuhausOtto von Guericke University MagdeburgVerified email at ovgu.de
David Osumi-SutherlandEuropean Bioinformatics InstituteVerified email at ebi.ac.uk
Laurel CooperOregon State UniversityVerified email at science.oregonstate.edu
Alexander D. DiehlAssociate Professor of Biomedical Informatics, University at BuffaloVerified email at buffalo.edu

Christopher J Mungall

Lawrence Berkeley National Laboratory

Verified email at lbl.gov - Homepage

Bioinformatics Ontologies Artificial Intelligence Systems Biology Machine Reasoning


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Genome sequence of the human malaria parasite Plasmodium falciparum MJ Gardner, N Hall, E Fung, O White, M Berriman, RW Hyman, JM Carlton, ... Nature 419 (6906), 498-511, 2002	4802	2002
The Gene Ontology (GO) database and informatics resource Gene Ontology Consortium Nucleic acids research 32 (suppl_1), D258-D261, 2004	4305*	2004
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration B Smith, M Ashburner, C Rosse, J Bard, W Bug, W Ceusters, LJ Goldberg, ... Nature biotechnology 25 (11), 1251-1255, 2007	2463	2007
Comparative genomics of the eukaryotes GM Rubin, MD Yandell, JR Wortman, GL Gabor, CR Nelson, IK Hariharan, ... Science 287 (5461), 2204-2215, 2000	1941	2000
The Bioperl toolkit: Perl modules for the life sciences JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ... Genome research 12 (10), 1611-1618, 2002	1819	2002
An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455-461, 2014	1787	2014
The gene ontology resource: 20 years and still GOing strong Gene Ontology Consortium Nucleic acids research 47 (D1), D330-D338, 2019	1433	2019
AmiGO: online access to ontology and annotation data S Carbon, A Ireland, CJ Mungall, SQ Shu, B Marshall, S Lewis, ... Bioinformatics 25 (2), 288-289, 2009	1413	2009
The generic genome browser: a building block for a model organism system database LD Stein, C Mungall, SQ Shu, M Caudy, M Mangone, A Day, E Nickerson, ... Genome research 12 (10), 1599-1610, 2002	1287	2002
Relations in biomedical ontologies B Smith, W Ceusters, B Klagges, J Köhler, A Kumar, J Lomax, C Mungall, ... Genome biology 6 (5), R46, 2005	1265	2005
A promoter-level mammalian expression atlas Fantom Consortium Nature 507 (7493), 462, 2014	1165	2014
Creating the gene ontology resource: design and implementation Gene Ontology Consortium Genome research 11 (8), 1425-1433, 2001	1154	2001
Tools for neuroanatomy and neurogenetics in Drosophila BD Pfeiffer, A Jenett, AS Hammonds, TTB Ngo, S Misra, C Murphy, ... Proceedings of the National Academy of Sciences 105 (28), 9715-9720, 2008	796	2008
The Sequence Ontology: a tool for the unification of genome annotations K Eilbeck, SE Lewis, CJ Mungall, M Yandell, L Stein, R Durbin, ... Genome biology 6 (5), 1-12, 2005	770	2005
The FlyBase database of the Drosophila genome projects and community literature FlyBase Consortium Nucleic acids research 31 (1), 172-175, 2003	754*	2003
The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data S Köhler, SC Doelken, CJ Mungall, S Bauer, HV Firth, I Bailleul-Forestier, ... Nucleic acids research 42 (D1), D966-D974, 2014	740	2014
JBrowse: a next-generation genome browser ME Skinner, AV Uzilov, LD Stein, CJ Mungall, IH Holmes Genome research 19 (9), 1630-1638, 2009	689	2009
The gene ontology (GO) project in 2006 Gene Ontology Consortium Nucleic acids research 34 (suppl_1), D322-D326, 2006	653	2006
The human phenotype ontology in 2017 S Köhler, NA Vasilevsky, M Engelstad, E Foster, J McMurry, S Aymé, ... Nucleic acids research 45 (D1), D865-D876, 2017	548	2017
Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data WA Kibbe, C Arze, V Felix, E Mitraka, E Bolton, G Fu, CJ Mungall, ... Nucleic acids research 43 (D1), D1071-D1078, 2015	498	2015

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