| A single-cell atlas of the tumor and immune ecosystem of human breast cancer J Wagner, MA Rapsomaniki, S Chevrier, T Anzeneder, C Langwieder, ... Cell 177 (5), 1330-1345. e18, 2019 | 713 | 2019 |
| easyFRAP: an interactive, easy-to-use tool for qualitative and quantitative analysis of FRAP data MA Rapsomaniki, P Kotsantis, IE Symeonidou, NN Giakoumakis, ... Bioinformatics 28 (13), 1800-1801, 2012 | 180 | 2012 |
| EasyFRAP-web: a web-based tool for the analysis of fluorescence recovery after photobleaching data G Koulouras, A Panagopoulos, MA Rapsomaniki, NN Giakoumakis, ... Nucleic acids research 46 (W1), W467-W472, 2018 | 149 | 2018 |
| Quantification of tumor heterogeneity: from data acquisition to metric generation A Kashyap, MA Rapsomaniki, V Barros, A Fomitcheva-Khartchenko, ... Trends in Biotechnology 40 (6), 647-676, 2022 | 66 | 2022 |
| CK1δ restrains lipin-1 induction, lipid droplet formation and cell proliferation under hypoxia by reducing HIF-1α/ARNT complex formation M Kourti, G Ikonomou, NN Giakoumakis, MA Rapsomaniki, U Landegren, ... Cellular signalling 27 (6), 1129-1140, 2015 | 50 | 2015 |
| CellCycleTRACER accounts for cell cycle and volume in mass cytometry data MA Rapsomaniki, XK Lun, S Woerner, M Laumanns, B Bodenmiller, ... Nature Communications 9 (1), 632, 2018 | 42 | 2018 |
| Multi-step loading of human minichromosome maintenance proteins in live human cells IE Symeonidou, P Kotsantis, V Roukos, MA Rapsomaniki, HE Grecco, ... Journal of Biological Chemistry 288 (50), 35852-35867, 2013 | 40 | 2013 |
| Analysis of protein kinetics using fluorescence recovery after photobleaching (FRAP) NN Giakoumakis, MA Rapsomaniki, Z Lygerou Light Microscopy: Methods and Protocols, 243-267, 2017 | 30 | 2017 |
| IPP complex reinforces adhesion by relaying tension-dependent signals to inhibit integrin turnover KM Vakaloglou, G Chrysanthis, MA Rapsomaniki, Z Lygerou, CG Zervas Cell reports 14 (11), 2668-2682, 2016 | 21 | 2016 |
| ATHENA: analysis of tumor heterogeneity from spatial omics measurements AL Martinelli, MA Rapsomaniki Bioinformatics 38 (11), 3151-3153, 2022 | 20 | 2022 |
| Inference of protein kinetics by stochastic modeling and simulation of fluorescence recovery after photobleaching experiments MA Rapsomaniki, E Cinquemani, NN Giakoumakis, P Kotsantis, ... Bioinformatics 31 (3), 355-362, 2015 | 17 | 2015 |
| Towards quantum-enabled cell-centric therapeutics S Basu, J Born, A Bose, S Capponi, D Chalkia, TA Chan, H Doga, ... arXiv preprint arXiv:2307.05734, 2023 | 11 | 2023 |
| Matching single cells across modalities with contrastive learning and optimal transport F Gossi, P Pati, P Chouvardas, AL Martinelli, M Kruithof-de Julio, ... Briefings in bioinformatics 24 (3), bbad130, 2023 | 11 | 2023 |
| Inference of the three-dimensional chromatin structure and its temporal behavior BC Cristescu, Z Borsos, J Lygeros, MR Martínez, MA Rapsomaniki arXiv preprint arXiv:1811.09619, 2018 | 8 | 2018 |
| Hybrid quantum-classical graph neural networks for tumor classification in digital pathology A Ray, D Madan, S Patil, MA Rapsomaniki, P Pati arXiv preprint arXiv:2310.11353, 2023 | 5 | 2023 |
| A novel pre-miRNA classification approach for the prediction of microRNA genes KA Theofilatos, DA Kleftogiannis, MAV Rapsomaniki, VA Haidinis, ... Proceedings of the 10th IEEE International Conference on Information …, 2010 | 5 | 2010 |
| Multiplexed tumor profiling with generative AI accelerates histopathology workflows and improves clinical predictions P Pati, S Karkampouna, F Bonollo, E Comperat, M Radic, M Spahn, ... bioRxiv, 2023.11. 29.568996, 2023 | 4 | 2023 |
| In silico analysis of DNA re-replication across a complete genome reveals cell-to-cell heterogeneity and genome plasticity MA Rapsomaniki, S Maxouri, P Nathanailidou, MR Garrastacho, ... NAR genomics and bioinformatics 3 (1), lqaa112, 2021 | 4 | 2021 |
| Recurrent autoencoder for chromatin 3D structure prediction MA Rapsomaniki, BC Cristescu, MR Martinez US Patent 11,475,275, 2022 | 3 | 2022 |
| A novel pipeline method for the preprocessing of Mass spectrometry proteomics data MAV Rapsomaniki, PG Zerefos, KA Theofilatos, SD Likothanassis, ... Proceedings of the 10th IEEE International Conference on Information …, 2010 | 3 | 2010 |
Zoi LygerouProfessor, Medical School, University of Patras, GreeceVerified email at upatras.gr
