| Hierarchical attention networks for information extraction from cancer pathology reports S Gao, MT Young, JX Qiu, HJ Yoon, JB Christian, PA Fearn, GD Tourassi, ... Journal of the American Medical Informatics Association 25 (3), 321-330, 2018 | 147 | 2018 |
| Limitations of transformers on clinical text classification S Gao, M Alawad, MT Young, J Gounley, N Schaefferkoetter, HJ Yoon, ... IEEE journal of biomedical and health informatics 25 (9), 3596-3607, 2021 | 108 | 2021 |
| Automatic extraction of cancer registry reportable information from free-text pathology reports using multitask convolutional neural networks M Alawad, S Gao, JX Qiu, HJ Yoon, J Blair Christian, L Penberthy, ... Journal of the American Medical Informatics Association 27 (1), 89-98, 2020 | 83 | 2020 |
| Deep clustering of protein folding simulations D Bhowmik, S Gao, MT Young, A Ramanathan BMC bioinformatics 19, 47-58, 2018 | 76 | 2018 |
| Hierarchical convolutional attention networks for text classification S Gao, A Ramanathan, G Tourassi Proceedings of The Third Workshop on Representation Learning for NLP, 11-23, 2018 | 69 | 2018 |
| Classifying cancer pathology reports with hierarchical self-attention networks S Gao, JX Qiu, M Alawad, JD Hinkle, N Schaefferkoetter, HJ Yoon, ... Artificial intelligence in medicine 101, 101726, 2019 | 47 | 2019 |
| A pre-training and self-training approach for biomedical named entity recognition S Gao, O Kotevska, A Sorokine, JB Christian PloS one 16 (2), e0246310, 2021 | 44 | 2021 |
| Privacy-preserving deep learning NLP models for cancer registries M Alawad, HJ Yoon, S Gao, B Mumphrey, XC Wu, EB Durbin, JC Jeong, ... IEEE transactions on emerging topics in computing 9 (3), 1219-1230, 2020 | 39 | 2020 |
| Class imbalance in out-of-distribution datasets: Improving the robustness of the TextCNN for the classification of rare cancer types K De Angeli, S Gao, I Danciu, EB Durbin, XC Wu, A Stroup, J Doherty, ... Journal of biomedical informatics 125, 103957, 2022 | 38 | 2022 |
| The deformation pattern of single crystal â-Ga2O3 under nanoindentation YQ Wu, S Gao, H Huang Materials Science in Semiconductor Processing 71, 321-325, 2017 | 38 | 2017 |
| Tuning the flat bands of the kagome metal CoSn with Fe, In, or Ni doping BC Sales, WR Meier, AF May, J Xing, JQ Yan, S Gao, YH Liu, MB Stone, ... Physical Review Materials 5 (4), 044202, 2021 | 31 | 2021 |
| Deep active learning for classifying cancer pathology reports K De Angeli, S Gao, M Alawad, HJ Yoon, N Schaefferkoetter, XC Wu, ... BMC bioinformatics 22, 1-25, 2021 | 28 | 2021 |
| Language models for the prediction of SARS-CoV-2 inhibitors AE Blanchard, J Gounley, D Bhowmik, M Chandra Shekar, I Lyngaas, ... The International Journal of High Performance Computing Applications 36 (5-6 …, 2022 | 22 | 2022 |
| C. d. Cruz, M. Frontzek, MB Stone, and AD Christianson S Gao, MA McGuire, Y Liu, DL Abernathy Phys. Rev. Lett 128, 227201, 2022 | 21 | 2022 |
| Accelerated training of bootstrap aggregation-based deep information extraction systems from cancer pathology reports HJ Yoon, HB Klasky, JP Gounley, M Alawad, S Gao, EB Durbin, XC Wu, ... Journal of biomedical informatics 110, 103564, 2020 | 17 | 2020 |
| Automating genetic algorithm mutations for molecules using a masked language model AE Blanchard, MC Shekar, S Gao, J Gounley, I Lyngaas, J Glaser, ... IEEE Transactions on Evolutionary Computation 26 (4), 793-799, 2022 | 16 | 2022 |
| Photoacoustic necrotic region mapping for radiofrequency ablation guidance S Gao, H Ashikaga, T Mansi, HR Halperin, HK Zhang 2021 IEEE International Ultrasonics Symposium (IUS), 1-4, 2021 | 16 | 2021 |
| Using case-level context to classify cancer pathology reports S Gao, M Alawad, N Schaefferkoetter, L Penberthy, XC Wu, EB Durbin, ... PLoS One 15 (5), e0232840, 2020 | 16 | 2020 |
| Model-based hyperparameter optimization of convolutional neural networks for information extraction from cancer pathology reports on HPC HJ Yoon, J Gounley, S Gao, M Alawad, A Ramanathan, G Tourassi 2019 IEEE EMBS International Conference on Biomedical & Health Informatics …, 2019 | 16 | 2019 |
| Deep transfer learning across cancer registries for information extraction from pathology reports M Alawad, S Gao, J Qiu, N Schaefferkoetter, JD Hinkle, HJ Yoon, ... 2019 IEEE EMBS International Conference on Biomedical & Health Informatics …, 2019 | 16 | 2019 |
