James A. Overton
James A. Overton
Knocean
Verified email at overton.ca - Homepage
Title
Cited by
Cited by
Year
The immune epitope database (IEDB) 3.0
R Vita, JA Overton, JA Greenbaum, J Ponomarenko, JD Clark, JR Cantrell, ...
Nucleic acids research 43 (D1), D405-D412, 2015
7602015
The immune epitope database (IEDB): 2018 update
R Vita, S Mahajan, JA Overton, SK Dhanda, S Martini, JR Cantrell, ...
Nucleic acids research 47 (D1), D339-D343, 2019
2832019
The ontology for biomedical investigations
A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ...
PloS one 11 (4), e0154556, 2016
1742016
Biomedical imaging ontologies: A survey and proposal for future work
B Smith, S Arabandi, M Brochhausen, M Calhoun, P Ciccarese, S Doyle, ...
Journal of pathology informatics 6, 2015
332015
“Explain” in scientific discourse
JA Overton
Synthese 190 (8), 1383-1405, 2013
282013
The eXtensible ontology development (XOD) principles and tool implementation to support ontology interoperability
Y He, Z Xiang, J Zheng, Y Lin, JA Overton, E Ong
Journal of biomedical semantics 9 (1), 3, 2018
272018
Basic Formal Ontology 2.0: Specification and user’s guide
B Smith, M Almeida, J Bona, M Brochhausen, W Ceusters, M Courtot, ...
National Center for Ontological Research: Buffalo, NY, USA, 2015
262015
ROBOT: A tool for automating ontology workflows
RC Jackson, JP Balhoff, E Douglass, NL Harris, CJ Mungall, JA Overton
BMC bioinformatics 20 (1), 407, 2019
182019
ROBOT: A command-line tool for ontology development.
JA Overton, H Dietze, S Essaid, D Osumi-Sutherland, CJ Mungall
ICBO, 2015
172015
Query enhancement through the practical application of ontology: the IEDB and OBI
R Vita, JA Overton, JA Greenbaum, A Sette, B Peters
Journal of biomedical semantics 4 (1), 1-10, 2013
132013
An ontology for major histocompatibility restriction
R Vita, JA Overton, E Seymour, J Sidney, J Kaufman, RL Tallmadge, ...
Journal of biomedical semantics 7 (1), 1, 2016
122016
Open Biomedical Ontologies applied to prostate cancer
JA Overton, C Romagnoli, R Chhem
Applied Ontology 6 (1), 35-51, 2011
122011
Semantic representation of reported measurements in radiology
H Oberkampf, S Zillner, JA Overton, B Bauer, A Cavallaro, M Uder, ...
BMC medical informatics and decision making 16 (1), 1-12, 2015
112015
The immune epitope database (IEDB) 3.0
X Dai, L Chen, J Li, Y Wu, Y Hu, R Vita, JA Overton, JA Greenbaum, ...
Cancer Med 43, D405-D412, 2015
112015
Mechanisms, types, and abstractions
JA Overton
Philosophy of Science 78 (5), 941-954, 2011
102011
FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability
R Vita, JA Overton, CJ Mungall, A Sette, B Peters
Database 2018, 2018
92018
Developing the Quantitative Histopathology Image Ontology (QHIO): A case study using the hot spot detection problem
MN Gurcan, J Tomaszewski, JA Overton, S Doyle, A Ruttenberg, B Smith
Journal of biomedical informatics 66, 129-135, 2017
92017
Radiological and biomedical knowledge integration: The ontological way
R Arp, C Romagnoli, RK Chhem, JA Overton
Radiology education, 87-104, 2009
72009
Better living through ontologies at the Immune Epitope Database
R Vita, JA Overton, A Sette, B Peters
Database 2017, 2017
62017
Explanation in Science
JA Overton
32012
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Articles 1–20