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Erik Garrison
Erik Garrison
Associate Professor, University of Tennessee Health Science Center
Verified email at uthsc.edu - Homepage
Title
Cited by
Cited by
Year
A global reference for human genetic variation
1000 Genomes Project Consortium
Nature 526 (7571), 68, 2015
156182015
A map of human genome variation from population scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
88692010
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
83812012
Haplotype-based variant detection from short-read sequencing
E Garrison, G Marth
arXiv preprint arXiv:1207.3907, 2012
4594*2012
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
24682015
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
22452022
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
18422021
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
16292020
BamTools: a C++ API and toolkit for analyzing and managing BAM files
DW Barnett, EK Garrison, AR Quinlan, MP Strömberg, GT Marth
Bioinformatics 27 (12), 1691-1692, 2011
9792011
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011
7272011
Variation graph toolkit improves read mapping by representing genetic variation in the reference
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
Nature biotechnology 36 (9), 875-879, 2018
6082018
SpeedSeq: ultra-fast personal genome analysis and interpretation
C Chiang, RM Layer, GG Faust, MR Lindberg, DB Rose, EP Garrison, ...
Nature methods 12 (10), 966, 2015
5552015
A global reference for human genetic variation
GP Consortium, A Auton, LD Brooks, RM Durbin, EP Garrison, HM Kang
Nature 526 (7571), 68-74, 2015
4932015
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
4752023
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 3934, 2014
4562014
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
K Shafin, T Pesout, R Lorig-Roach, M Haukness, HE Olsen, C Bosworth, ...
Nature biotechnology 38 (9), 1044-1053, 2020
4392020
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 1235587, 2013
4242013
Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences
GD Poznik, Y Xue, FL Mendez, TF Willems, A Massaia, MA Wilson Sayres, ...
Nature genetics 48 (6), 593-599, 2016
3652016
Computational pan-genomics: status, promises and challenges
Briefings in bioinformatics 19 (1), 118-135, 2018
3472018
MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping
WP Lee, MP Stromberg, A Ward, C Stewart, EP Garrison, GT Marth
PloS one 9 (3), e90581, 2014
3462014
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