| Analysis of HETEs in human whole blood by chiral UHPLC-ECAPCI/HRMS LL Mazaleuskaya, A Salamatipour, D Sarantopoulou, L Weng, ... Journal of Lipid Research 59 (3), 564-575, 2018 | 45 | 2018 |
| DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity R Roy, S Ramamoorthy, BD Shapiro, M Kaileh, D Hernandez, ... Immunity 54 (11), 2465-2480. e5, 2021 | 39 | 2021 |
| Comparative evaluation of full-length isoform quantification from RNA-Seq D Sarantopoulou, TG Brooks, S Nayak, A Mrčela, NF Lahens, GR Grant BMC bioinformatics 22 (1), 266, 2021 | 30 | 2021 |
| Comparative evaluation of RNA-Seq library preparation methods for strand-specificity and low input D Sarantopoulou, SY Tang, E Ricciotti, NF Lahens, D Lekkas, J Schug, ... Scientific reports 9 (1), 13477, 2019 | 29 | 2019 |
| Age attenuates the transcriptional changes that occur with sleep in the medial prefrontal cortex X Guo, BT Keenan, D Sarantopoulou, DC Lim, J Lian, GR Grant, AI Pack Aging cell 18 (6), e13021, 2019 | 18 | 2019 |
| Aging exacerbates the brain inflammatory micro-environment contributing to á-synuclein pathology and functional deficits in a mouse model of DLB/PD M Iba, RA McDevitt, C Kim, R Roy, D Sarantopoulou, E Tommer, ... Molecular neurodegeneration 17 (1), 60, 2022 | 14 | 2022 |
| Sexual dimorphism in the response to chronic circadian misalignment on a high-fat diet ST Anderson, H Meng, TG Brooks, SY Tang, R Lordan, A Sengupta, ... Science Translational Medicine 15 (696), eabo2022, 2023 | 10 | 2023 |
| Distinct vascular genomic response of proton and gamma radiation—A pilot investigation E Ricciotti, D Sarantopoulou, GR Grant, JK Sanzari, GS Krigsfeld, AJ Kiliti, ... Plos one 14 (2), e0207503, 2019 | 8 | 2019 |
| RNA-seq analysis of galaninergic neurons from ventrolateral preoptic nucleus identifies expression changes between sleep and wake X Guo, X Gao, BT Keenan, J Zhu, D Sarantopoulou, J Lian, RJ Galante, ... BMC genomics 21, 1-15, 2020 | 5 | 2020 |
| DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity R Roy, S Ramamoorthy, BD Shapiro, M Kaileh, D Hernandez, ... Immunity 55 (6), 1135, 2022 | 4 | 2022 |
| Hidden neural networks for transmembrane protein topology prediction IA Tamposis, D Sarantopoulou, MC Theodoropoulou, EA Stasi, PI Kontou, ... Computational and Structural Biotechnology Journal 19, 6090-6097, 2021 | 4 | 2021 |
| JUCHMME: a Java Utility for Class Hidden Markov Models and Extensions for biological sequence analysis IA Tamposis, KD Tsirigos, MC Theodoropoulou, PI Kontou, GN Tsaousis, ... Bioinformatics 35 (24), 5309-5312, 2019 | 4 | 2019 |
| CAMPAREE: a robust and configurable RNA expression simulator NF Lahens, TG Brooks, D Sarantopoulou, S Nayak, C Lawrence, A Mrčela, ... BMC genomics 22, 1-12, 2021 | 3 | 2021 |
| Iso-relevance Functions-A Systematic Approach to Ranking Genomic Features by Differential Effect Size S Nayak, NF Lahens, EJ Kim, E Ricciotti, G Paschos, S Tishkoff, ... bioRxiv, 381814, 2018 | 3 | 2018 |
| Epigenetic signature of human immune aging in the GESTALT study R Roy, PL Kuo, J Candia, D Sarantopoulou, C Ubaida-Mohien, ... Elife 12, e86136, 2023 | 1 | 2023 |
| Sex-dependent compensatory mechanisms preserve blood pressure homeostasis in prostacyclin receptor–deficient mice SY Tang, H Meng, ST Anderson, D Sarantopoulou, S Ghosh, NF Lahens, ... The Journal of Clinical Investigation 131 (14), 2021 | 1 | 2021 |
| BEERS2: RNA-Seq simulation through high fidelity in silico modeling TG Brooks, NF Lahens, A Mrčela, D Sarantopoulou, S Nayak, A Naik, ... Briefings in Bioinformatics 25 (3), bbae164, 2024 | | 2024 |
| Deciphering molecular and functional codes of human memory lymphocytes AK Singh, R Roy, M Kaileh, D Sarantopoulou, D Hernandez, S Arepalli, ... The Journal of Immunology 210 (1_Supplement), 239.20-239.20, 2023 | | 2023 |
| Unique and shared molecular features of human B and T lymphocyte memory differentiation AK Singh, R Roy, M Kaileh, D Sarantopoulou, D Hernandez, S Arepalli, ... The Journal of Immunology 208 (1_Supplement), 168.11-168.11, 2022 | | 2022 |
| Chromatin accessibility differences of human monocyte identify age associated inflammatory heterogeneity. AK Singh, M Kaileh, K Mazan-Mamczarz, A Palagani, R Roy, ... The Journal of Immunology 206 (1_Supplement), 64.18-64.18, 2021 | | 2021 |
