Dr. Yogesh Paudel
Dr. Yogesh Paudel
Genedata AG
Verified email at genedata.com
TitleCited byYear
Analyses of pig genomes provide insight into porcine demography and evolution
MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ...
Nature 491 (7424), 393, 2012
9542012
Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape
M Bosse, HJ Megens, O Madsen, Y Paudel, LAF Frantz, LB Schook, ...
PLoS genetics 8 (11), e1003100, 2012
1552012
Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes
LAF Frantz, JG Schraiber, O Madsen, HJ Megens, A Cagan, M Bosse, ...
Nature genetics 47 (10), 1141, 2015
1322015
Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression
M Bosse, HJ Megens, LAF Frantz, O Madsen, G Larson, Y Paudel, ...
Nature communications 5, 4392, 2014
129*2014
Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication
Y Paudel, O Madsen, HJ Megens, LAF Frantz, M Bosse, ...
BMC genomics 14 (1), 449, 2013
952013
Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus
LAF Frantz, JG Schraiber, O Madsen, HJ Megens, M Bosse, Y Paudel, ...
Genome biology 14 (9), R107, 2013
912013
Proteomic analysis of mouse oocytes reveals 28 candidate factors of the “reprogrammome”
MJ Pfeiffer, M Siatkowski, Y Paudel, ST Balbach, N Baeumer, N Crosetto, ...
Journal of proteome research 10 (5), 2140-2153, 2011
742011
The PluriNetWork: an electronic representation of the network underlying pluripotency in mouse, and its applications
A Som, C Harder, B Greber, M Siatkowski, Y Paudel, G Warsow, C Cap, ...
PloS one 5 (12), e15165, 2010
652010
Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergent Sus scrofa populations
M Bosse, HJ Megens, O Madsen, LAF Frantz, Y Paudel, ...
Molecular ecology 23 (16), 4089-4102, 2014
462014
Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs
A Esteve-Codina, Y Paudel, L Ferretti, E Raineri, HJ Megens, L Silió, ...
BMC genomics 14 (1), 148, 2013
412013
Copy number variation in the speciation of pigs: a possible prominent role for olfactory receptors
Y Paudel, O Madsen, HJ Megens, LAF Frantz, M Bosse, ...
BMC genomics 16 (1), 330, 2015
352015
Hybrid origin of European commercial pigs examined by an in-depth haplotype analysis on chromosome 1
M Bosse, O Madsen, HJ Megens, LAF Frantz, Y Paudel, ...
Frontiers in genetics 5, 442, 2015
142015
Evolution of Tibetan wild boars
LAF Frantz, O Madsen, HJ Megens, JG Schraiber, Y Paudel, M Bosse, ...
Nature genetics 47 (3), 188, 2015
102015
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical membrane proteins
S Ahmad, YH Singh, Y Paudel, T Mori, Y Sugita, K Mizuguchi
BMC bioinformatics 11 (1), 533, 2010
62010
SV-AUTOPILOT: optimized, automated construction of structural variation discovery and benchmarking pipelines
WY Leung, T Marschall, Y Paudel, L Falquet, H Mei, A Schönhuth, ...
BMC genomics 16 (1), 238, 2015
52015
Analyses of Eurasian wild and domestic pig genomes reveal long-term gene-flow and selection during domestication
LAF Frantz, JG Schraiber, O Madsen, HJ Megens, A Cagan, M Bosse, ...
Speciation and domestication in Suiformes: a genomic perspective, 149, 2015
12015
Structural variations in pig genomes
Y Paudel
Wageningen University, 2015
2015
Proteomic Approach to the Reprogramming Machinery of the Mouse Oocyte
MJ Pfeiffer, M Siatkowski, Y Paudel, ST Balbach, N Baeumer, N Crosetto, ...
Principles of Cloning, 407-417, 2014
2014
Domestication with gene-flow in pigs
LAF Frantz, M Bosse, H Megens, O Madsen, Y Paudel, R Crooijmans, ...
2014
Pig variomics: understanding the when, where, and why of variation in the genome of Sus scrofa
H Megens, M Bosse, O Madsen, LAF Frantz, Y Paudel, ...
Livestock Genomics Meeting, Cambridge, United Kingdom, 2014
2014
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