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Daniel C Ilut
Daniel C Ilut
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Verified email at cornell.edu
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Complex history of the amphibian-killing chytrid fungus revealed with genome resequencing data
EB Rosenblum, TY James, KR Zamudio, TJ Poorten, D Ilut, D Rodriguez, ...
Proceedings of the National Academy of Sciences 110 (23), 9385-9390, 2013
3042013
Floral gene resources from basal angiosperms for comparative genomics research
VA Albert, DE Soltis, JE Carlson, WG Farmerie, PK Wall, DC Ilut, ...
BMC plant biology 5 (1), 5, 2005
1332005
Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean
RW Innes, C Ameline-Torregrosa, T Ashfield, E Cannon, SB Cannon, ...
Plant Physiology 148 (4), 1740-1759, 2008
1302008
Defining loci in restriction-based reduced representation genomic data from nonmodel species: sources of bias and diagnostics for optimal clustering
DC Ilut, ML Nydam, MP Hare
BioMed research international 2014, 2014
992014
A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species
DC Ilut, JE Coate, AK Luciano, TG Owens, GD May, A Farmer, JJ Doyle
American journal of botany 99 (2), 383-396, 2012
992012
Polyploidy did not predate the evolution of nodulation in all legumes
SB Cannon, D Ilut, AD Farmer, SL Maki, GD May, SR Singer, JJ Doyle
PLoS One 5 (7), e11630, 2010
912010
Novel loci underlie natural variation in vitamin E levels in maize grain
CH Diepenbrock, CB Kandianis, AE Lipka, M Magallanes-Lundback, ...
The Plant Cell 29 (10), 2374-2392, 2017
712017
EST database for early flower development in California poppy (Eschscholzia californica Cham., Papaveraceae) tags over 6000 genes from a basal eudicot
JE Carlson, JH Leebens-Mack, PK Wall, LM Zahn, LA Mueller, ...
Plant molecular biology 62 (3), 351-369, 2006
502006
Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium
OP Yurchenko, S Park, DC Ilut, JJ Inmon, JC Millhollon, Z Liechty, ...
BMC plant biology 14 (1), 312, 2014
462014
Replication of nonautonomous retroelements in soybean appears to be both recent and common
A Wawrzynski, T Ashfield, NWG Chen, J Mammadov, A Nguyen, ...
Plant Physiology 148 (4), 1760-1771, 2008
452008
Identification of haplotypes at the Rsv4 genomic region in soybean associated with durable resistance to soybean mosaic virus
DC Ilut, AE Lipka, N Jeong, DN Bae, DH Kim, JH Kim, N Redekar, K Yang, ...
Theoretical and Applied Genetics 129 (3), 453-468, 2016
412016
A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction
SE Jensen, JR Charles, K Muleta, PJ Bradbury, T Casstevens, ...
The Plant Genome 13 (1), e20009, 2020
392020
An EST database for Liriodendron tulipifera L. floral buds: the first EST resource for functional and comparative genomics in Liriodendron
H Liang, JE Carlson, JH Leebens-Mack, PK Wall, LA Mueller, M Buzgo, ...
Tree Genetics & Genomes 4 (3), 419-433, 2008
362008
rAmpSeq: Using repetitive sequences for robust genotyping
ES Buckler, DC Ilut, X Wang, T Kretzschmar, MA Gore, SE Mitchell
bioRxiv, 096628, 2016
332016
A century of guayule: Comprehensive genetic characterization of the US national guayule (Parthenium argentatum A. Gray) germplasm collection
DC Ilut, PL Sanchez, TA Coffelt, JM Dyer, MA Jenks, MA Gore
Industrial Crops and Products 109, 300-309, 2017
302017
Population genomic analysis reveals differential evolutionary histories and patterns of diversity across subgenomes and subpopulations of Brassica napus L.
E Gazave, EE Tassone, DC Ilut, M Wingerson, E Datema, H Witsenboer, ...
Frontiers in plant science 7, 525, 2016
302016
Venturing beyond beans and peas: what can we learn from Chamaecrista?
SR Singer, SL Maki, AD Farmer, D Ilut, GD May, SB Cannon, JJ Doyle
Plant physiology 151 (3), 1041-1047, 2009
282009
Genomic diversity and phylogenetic relationships in the genus Parthenium (Asteraceae)
DC Ilut, PL Sanchez, DE Costich, B Friebe, TA Coffelt, JM Dyer, MA Jenks, ...
Industrial Crops and Products 76, 920-929, 2015
272015
Analysis of genomic sequences from peanut (Arachis hypogaea)
B Jayashree, M Ferguson, D Ilut, J Doyle, JH Crouch
Electron J Biotechnol 8 (3), 2005
232005
Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain
CH Diepenbrock, DC Ilut, M Magallanes-Lundback, CB Kandianis, ...
The Plant Cell 33 (4), 882-900, 2021
162021
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