Theo Liakopoulos
Theo Liakopoulos
UCG
Verified email at ucg.gr
Title
Cited by
Cited by
Year
PRED-TMBB: a web server for predicting the topology of ‚-barrel outer membrane proteins
PG Bagos, TD Liakopoulos, IC Spyropoulos, SJ Hamodrakas
Nucleic acids research 32 (suppl_2), W400-W404, 2004
3942004
Combined prediction of Tat and Sec signal peptides with hidden Markov models
PG Bagos, EP Nikolaou, TD Liakopoulos, KD Tsirigos
Bioinformatics 26 (22), 2811-2817, 2010
2142010
A Hidden Markov Model method, capable of predicting and discriminating ‚-barrel outer membrane proteins
PG Bagos, TD Liakopoulos, IC Spyropoulos, SJ Hamodrakas
BMC bioinformatics 5 (1), 1-13, 2004
2062004
TMRPres2D: high quality visual representation of transmembrane protein models
IC Spyropoulos, TD Liakopoulos, PG Bagos, SJ Hamodrakas
Bioinformatics 20 (17), 3258-3260, 2004
1542004
Evaluation of methods for predicting the topology of ‚-barrel outer membrane proteins and a consensus prediction method
PG Bagos, TD Liakopoulos, SJ Hamodrakas
BMC bioinformatics 6 (1), 1-13, 2005
1262005
Prediction of lipoprotein signal peptides in Gram-positive bacteria with a Hidden Markov Model
PG Bagos, KD Tsirigos, TD Liakopoulos, SJ Hamodrakas
Journal of proteome research 7 (12), 5082-5093, 2008
1172008
Evaluation of annotation strategies using an entire genome sequence
I Iliopoulos, S Tsoka, MA Andrade, AJ Enright, M Carroll, P Poullet, ...
Bioinformatics 19 (6), 717-726, 2003
1132003
Prediction of signal peptides in archaea
PG Bagos, KD Tsirigos, SK Plessas, TD Liakopoulos, SJ Hamodrakas
Protein Engineering, Design & Selection 22 (1), 27-35, 2009
962009
Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins
PG Bagos, TD Liakopoulos, SJ Hamodrakas
BMC bioinformatics 7 (1), 1-17, 2006
722006
Prediction of cell wall sorting signals in gram-positive bacteria with a hidden markov model: application to complete genomes
ZI Litou, PG Bagos, KD Tsirigos, TD Liakopoulos, SJ Hamodrakas
Journal of bioinformatics and computational biology 6 (02), 387-401, 2008
312008
A novel tool for the prediction of transmembrane protein topology based on a statistical analysis of the SwissProt database: the OrienTM algorithm
TD Liakopoulos, C Pasquier, SJ Hamodrakas
Protein engineering 14 (6), 387-390, 2001
262001
waveTM: Wavelet-based transmembrane segment prediction
EE Pashou, ZI Litou, TD Liakopoulos, SJ Hamodrakas
In silico biology 4 (2), 127-131, 2004
242004
CW-PRED: a HMM-based method for the classification of cell wall-anchored proteins of Gram-positive bacteria
DK Fimereli, KD Tsirigos, ZI Litou, TD Liakopoulos, PG Bagos, ...
Artificial Intelligence: Theories and Applications. 7th Hellenic Conference†…, 2012
232012
ExTopoDB: a database of experimentally derived topological models of transmembrane proteins
GN Tsaousis, KD Tsirigos, XD Andrianou, TD Liakopoulos, PG Bagos, ...
Bioinformatics 26 (19), 2490-2492, 2010
222010
Finding beta-barrel outer membrane proteins with a Markov Chain Model
PG Bagos, TD Liakopoulos, SJ Hamodrakas
WSEAS Transactions on Biology and Biomedicine 2 (1), 186-189, 2004
212004
Faster gradient descent training of hidden Markov models, using individual learning rate adaptation
PG Bagos, TD Liakopoulos, SJ Hamodrakas
Grammatical Inference: Algorithms and Applications. 7th International†…, 2004
152004
A multipoint method for meta‐analysis of genetic association studies
PG Bagos, TD Liakopoulos
Genetic epidemiology 34 (7), 702-715, 2010
92010
Meta-analysis of family-based and case-control genetic association studies that use the same cases
PG Bagos, NL Dimou, TD Liakopoulos, GK Nikolopoulos
Statistical Applications in Genetics and Molecular Biology 10 (1), 2011
82011
Prediction of beta-barrel Outer Membrane Proteins
PG Bagos, TD Liakopoulos, VJ Promponas, SJ Hamodrakas
Proceedings - Indian National Science Academy Part B 71 (1), 19, 2005
32005
Maximum likelihood and conditional maximum likelihood learning algorithms for hidden Markov models with labeled data: application to transmembrane protein topology prediction
PG Bagos, THD Liakopoulos, SJ Hamodrakas
Computational Methods In Sciences And Engineering 2003, 47-55, 2003
22003
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Articles 1–20