Theo Liakopoulos
Theo Liakopoulos
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PRED-TMBB: a web server for predicting the topology of ‚-barrel outer membrane proteins
PG Bagos, TD Liakopoulos, IC Spyropoulos, SJ Hamodrakas
Nucleic acids research 32 (suppl_2), W400-W404, 2004
Combined prediction of Tat and Sec signal peptides with hidden Markov models
PG Bagos, EP Nikolaou, TD Liakopoulos, KD Tsirigos
Bioinformatics 26 (22), 2811-2817, 2010
A Hidden Markov Model method, capable of predicting and discriminating ‚-barrel outer membrane proteins
PG Bagos, TD Liakopoulos, IC Spyropoulos, SJ Hamodrakas
BMC bioinformatics 5 (1), 1-13, 2004
TMRPres2D: high quality visual representation of transmembrane protein models
IC Spyropoulos, TD Liakopoulos, PG Bagos, SJ Hamodrakas
Bioinformatics 20 (17), 3258-3260, 2004
Evaluation of methods for predicting the topology of ‚-barrel outer membrane proteins and a consensus prediction method
PG Bagos, TD Liakopoulos, SJ Hamodrakas
BMC bioinformatics 6 (1), 1-13, 2005
Prediction of lipoprotein signal peptides in Gram-positive bacteria with a Hidden Markov Model
PG Bagos, KD Tsirigos, TD Liakopoulos, SJ Hamodrakas
Journal of proteome research 7 (12), 5082-5093, 2008
Evaluation of annotation strategies using an entire genome sequence
I Iliopoulos, S Tsoka, MA Andrade, AJ Enright, M Carroll, P Poullet, ...
Bioinformatics 19 (6), 717-726, 2003
Prediction of signal peptides in archaea
PG Bagos, KD Tsirigos, SK Plessas, TD Liakopoulos, SJ Hamodrakas
Protein Engineering, Design & Selection 22 (1), 27-35, 2009
Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins
PG Bagos, TD Liakopoulos, SJ Hamodrakas
BMC bioinformatics 7 (1), 1-17, 2006
Prediction of cell wall sorting signals in gram-positive bacteria with a hidden markov model: application to complete genomes
ZI Litou, PG Bagos, KD Tsirigos, TD Liakopoulos, SJ Hamodrakas
Journal of bioinformatics and computational biology 6 (02), 387-401, 2008
A novel tool for the prediction of transmembrane protein topology based on a statistical analysis of the SwissProt database: the OrienTM algorithm
TD Liakopoulos, C Pasquier, SJ Hamodrakas
Protein engineering 14 (6), 387-390, 2001
waveTM: Wavelet-based transmembrane segment prediction
EE Pashou, ZI Litou, TD Liakopoulos, SJ Hamodrakas
In silico biology 4 (2), 127-131, 2004
CW-PRED: a HMM-based method for the classification of cell wall-anchored proteins of Gram-positive bacteria
DK Fimereli, KD Tsirigos, ZI Litou, TD Liakopoulos, PG Bagos, ...
Artificial Intelligence: Theories and Applications. 7th Hellenic Conference†…, 2012
ExTopoDB: a database of experimentally derived topological models of transmembrane proteins
GN Tsaousis, KD Tsirigos, XD Andrianou, TD Liakopoulos, PG Bagos, ...
Bioinformatics 26 (19), 2490-2492, 2010
Finding beta-barrel outer membrane proteins with a Markov Chain Model
PG Bagos, TD Liakopoulos, SJ Hamodrakas
WSEAS Transactions on Biology and Biomedicine 2 (1), 186-189, 2004
Faster gradient descent training of hidden Markov models, using individual learning rate adaptation
PG Bagos, TD Liakopoulos, SJ Hamodrakas
Grammatical Inference: Algorithms and Applications. 7th International†…, 2004
A multipoint method for meta‐analysis of genetic association studies
PG Bagos, TD Liakopoulos
Genetic epidemiology 34 (7), 702-715, 2010
Meta-analysis of family-based and case-control genetic association studies that use the same cases
PG Bagos, NL Dimou, TD Liakopoulos, GK Nikolopoulos
Statistical Applications in Genetics and Molecular Biology 10 (1), 2011
Prediction of beta-barrel Outer Membrane Proteins
PG Bagos, TD Liakopoulos, VJ Promponas, SJ Hamodrakas
Proceedings - Indian National Science Academy Part B 71 (1), 19, 2005
Maximum likelihood and conditional maximum likelihood learning algorithms for hidden Markov models with labeled data: application to transmembrane protein topology prediction
PG Bagos, THD Liakopoulos, SJ Hamodrakas
Computational Methods In Sciences And Engineering 2003, 47-55, 2003
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