Vassiliki Lila Koumandou
Vassiliki Lila Koumandou
Lecturer in Genetics, Biotechnology Department, Agricultural University of Athens
Verified email at aua.gr
TitleCited byYear
Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins
VL Koumandou, JB Dacks, RMR Coulson, MC Field
BMC evolutionary biology 7 (1), 29, 2007
1822007
Molecular paleontology and complexity in the last eukaryotic common ancestor
VL Koumandou, B Wickstead, ML Ginger, M Van Der Giezen, JB Dacks, ...
Critical reviews in biochemistry and molecular biology 48 (4), 373-396, 2013
1182013
Evolution of the chloroplast genome
CJ Howe, AC Barbrook, VL Koumandou, RER Nisbet, HA Symington, ...
Philosophical Transactions of the Royal Society of London. Series B …, 2003
1072003
The trypanosome transcriptome is remodelled during differentiation but displays limited responsiveness within life stages
VL Koumandou, SKA Natesan, T Sergeenko, MC Field
BMC genomics 9 (1), 298, 2008
1022008
Evolutionary reconstruction of the retromer complex and its function in Trypanosoma brucei
VL Koumandou, MJ Klute, EK Herman, R Nunez-Miguel, JB Dacks, ...
J Cell Sci 124 (9), 1496-1509, 2011
822011
Dinoflagellate chloroplasts–where have all the genes gone?
VL Koumandou, RER Nisbet, AC Barbrook, CJ Howe
Trends in Genetics 20 (5), 261-267, 2004
732004
The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants
BM Porcel, F Denoeud, F Opperdoes, B Noel, MA Madoui, TC Hammarton, ...
PLoS genetics 10 (2), e1004007, 2014
622014
Species‐specific physiological response of dinoflagellates to quantified small‐scale turbulence1
E Berdalet, F Peters, VL Koumandou, C Roldan, O Guadayol, M Estrada
Journal of Phycology 43 (5), 965-977, 2007
592007
Novel plastid gene minicircles in the dinoflagellate Amphidinium operculatum
RER Nisbet, VL Koumandou, AC Barbrook, CJ Howe
Gene 331, 141-147, 2004
422004
Evolution of the plasma and tissue kallikreins, and their alternative splicing isoforms
VL Koumandou, A Scorilas
PLoS One 8 (7), e68074, 2013
402013
The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum
VL Koumandou, CJ Howe
Protist 158 (1), 89-103, 2007
322007
Evolution of the F0F1 ATP synthase complex in light of the patchy distribution of different bioenergetic pathways across prokaryotes
VL Koumandou, S Kossida
PLoS computational biology 10 (9), e1003821, 2014
222014
A holistic evolutionary and structural study of flaviviridae provides insights into the function and inhibition of HCV helicase
D Vlachakis, VL Koumandou, S Kossida
PeerJ 1, e74, 2013
222013
Evidence for recycling of invariant surface transmembrane domain proteins in African trypanosomes
VL Koumandou, C Boehm, KA Horder, MC Field
Eukaryotic cell 12 (2), 330-342, 2013
162013
Structural models for the design of novel antiviral agents against Greek Goat Encephalitis
L Papageorgiou, S Loukatou, VL Koumandou, W Makałowski, ...
PeerJ 2, e664, 2014
112014
Computer-aided drug design and biological evaluation of novel anti-Greek goat encephalitis agents
L Papageorgiou, D Vlachakis, VL Koumandou, N Papangelopoulos, ...
International Journal of Systems Biology and Biomedical Technologies (IJSBBT …, 2013
92013
Protein functional links in Trypanosoma brucei, identified by gene fusion analysis
D Dimitriadis, VL Koumandou, P Trimpalis, S Kossida
BMC evolutionary biology 11 (1), 193, 2011
72011
SAFE software and FED database to uncover protein-protein interactions using gene fusion analysis
D Tsagrasoulis, V Danos, M Kissa, P Trimpalis, VL Koumandou, ...
Evolutionary Bioinformatics 8, EBO. S8018, 2012
62012
Frequent gene fissions associated with human pathogenic bacteria
I Karamichali, VL Koumandou, AD Karagouni, S Kossida
Genomics 103 (1), 65-75, 2014
32014
Evolution of b-type cytochromes in prokaryotes
VL Koumandou, S Kossida
PeerJ PrePrints, 2015
22015
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