Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix D Liebschner, PV Afonine, ML Baker, G Bunkóczi, VB Chen, TI Croll, ... Acta Crystallographica Section D: Structural Biology 75 (10), 861-877, 2019 | 4834 | 2019 |
Polder maps: improving OMIT maps by excluding bulk solvent D Liebschner, PV Afonine, NW Moriarty, BK Poon, OV Sobolev, ... Acta Crystallographica Section D: Structural Biology 73 (2), 148-157, 2017 | 619 | 2017 |
Structure of photosystem II and substrate binding at room temperature ID Young, M Ibrahim, R Chatterjee, S Gul, FD Fuller, S Koroidov, ... Nature 540 (7633), 453-457, 2016 | 395 | 2016 |
An improved experimental databank of transferable multipolar atom models–ELMAM2. Construction details and applications S Domagała, B Fournier, D Liebschner, B Guillot, C Jelsch Acta Crystallographica Section A: Foundations of Crystallography 68 (3), 337-351, 2012 | 159 | 2012 |
AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination TC Terwilliger, D Liebschner, TI Croll, CJ Williams, AJ McCoy, BK Poon, ... Nature Methods 21 (1), 110-116, 2024 | 120* | 2024 |
On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin D Liebschner, M Dauter, A Brzuszkiewicz, Z Dauter Acta Crystallographica Section D: Biological Crystallography 69 (8), 1447-1462, 2013 | 78 | 2013 |
Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB) PD Adams, PV Afonine, K Baskaran, HM Berman, J Berrisford, G Bricogne, ... Acta Crystallographica Section D: Structural Biology 75 (4), 451-454, 2019 | 65 | 2019 |
Elucidation of the phosphate binding mode of DING proteins revealed by subangstrom X-ray crystallography D Liebschner, M Elias, S Moniot, B Fournier, K Scott, C Jelsch, B Guillot, ... Journal of the American Chemical Society 131 (22), 7879-7886, 2009 | 64 | 2009 |
On the influence of crystal size and wavelength on native SAD phasing D Liebschner, Y Yamada, N Matsugaki, M Senda, T Senda Acta Crystallographica Section D: Structural Biology 72 (6), 728-741, 2016 | 39 | 2016 |
Hydrogen atoms in protein structures: high-resolution X-ray diffraction structure of the DFPase M Elias, D Liebschner, J Koepke, C Lecomte, B Guillot, C Jelsch, ... BMC research notes 6, 1-7, 2013 | 36 | 2013 |
Accelerating crystal structure determination with iterative AlphaFold prediction TC Terwilliger, PV Afonine, D Liebschner, TI Croll, AJ McCoy, RD Oeffner, ... Acta Crystallographica Section D: Structural Biology 79 (3), 234-244, 2023 | 31 | 2023 |
Topological analysis of hydrogen bonds and weak interactions in protein helices via transferred experimental charge density parameters D Liebschner, C Jelsch, E Espinosa, C Lecomte, E Chabriere, B Guillot The Journal of Physical Chemistry A 115 (45), 12895-12904, 2011 | 29 | 2011 |
Radiation decay of thaumatin crystals at three X-ray energies D Liebschner, G Rosenbaum, M Dauter, Z Dauter Acta Crystallographica Section D: Biological Crystallography 71 (4), 772-778, 2015 | 26 | 2015 |
The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors M Sato, D Liebschner, Y Yamada, N Matsugaki, T Arakawa, SS Wills, ... Journal of Biological Chemistry 292 (29), 12126-12138, 2017 | 25 | 2017 |
Evaluation of models determined by neutron diffraction and proposed improvements to their validation and deposition D Liebschner, PV Afonine, NW Moriarty, P Langan, PD Adams Acta Crystallographica Section D: Structural Biology 74 (8), 800-813, 2018 | 22 | 2018 |
CERES: a cryo-EM re-refinement system for continuous improvement of deposited models D Liebschner, PV Afonine, NW Moriarty, BK Poon, VB Chen, PD Adams Biological Crystallography 77 (1), 48-61, 2021 | 16 | 2021 |
Interactive comparison and remediation of collections of macromolecular structures NW Moriarty, D Liebschner, HE Klei, N Echols, PV Afonine, JJ Headd, ... Protein Science 27 (1), 182-194, 2018 | 16 | 2018 |
Crystallographic analysis of murine p24γ2 Golgi dynamics domain M Nagae, D Liebschner, Y Yamada, K Morita‐Matsumoto, N Matsugaki, ... Proteins: Structure, Function, and Bioinformatics 85 (4), 764-770, 2017 | 12 | 2017 |
Implementation of the riding hydrogen model in CCTBX to support the next generation of X-ray and neutron joint refinement in Phenix D Liebschner, PV Afonine, AG Urzhumtsev, PD Adams Methods in enzymology 634, 177-199, 2020 | 11 | 2020 |
In situ ligand restraints from quantum-mechanical methods D Liebschner, NW Moriarty, BK Poon, PD Adams Acta Crystallographica Section D: Structural Biology 79 (2), 100-110, 2023 | 9 | 2023 |