| Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris: The Tabula Muris Consortium N Schaum, J Karkanias, NF Neff, AP May, SR Quake, T Wyss-Coray, ... Nature 562 (7727), 367, 2018 | 1067* | 2018 |
| In situ sequencing for RNA analysis in preserved tissue and cells R Ke, M Mignardi, A Pacureanu, J Svedlund, J Botling, C Wählby, ... Nature methods 10 (9), 857-860, 2013 | 908 | 2013 |
| Single-cell RNA-seq analysis of infiltrating neoplastic cells at the migrating front of human glioblastoma S Darmanis, SA Sloan, D Croote, M Mignardi, S Chernikova, ... Cell reports 21 (5), 1399-1410, 2017 | 852 | 2017 |
| Single-cell analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns M Enge, HE Arda, M Mignardi, J Beausang, R Bottino, SK Kim, SR Quake Cell 171 (2), 321-330. e14, 2017 | 526 | 2017 |
| Single-cell transcriptomic atlas of the human endometrium during the menstrual cycle W Wang, F Vilella, P Alama, I Moreno, M Mignardi, A Isakova, W Pan, ... Nature Medicine 26 (10), 1644-1653, 2020 | 378 | 2020 |
| In situ detection of individual mRNA molecules and protein complexes or post-translational modifications using padlock probes combined with the in situ proximity … I Weibrecht, E Lundin, S Kiflemariam, M Mignardi, I Grundberg, C Larsson, ... Nature protocols 8 (2), 355-372, 2013 | 107 | 2013 |
| Fourth generation of next‐generation sequencing technologies: Promise and consequences R Ke, M Mignardi, T Hauling, M Nilsson Human mutation 37 (12), 1363-1367, 2016 | 95 | 2016 |
| Spatial analysis to detect sequence variants C Galonska, M Mignardi US Patent 11,608,520, 2023 | 88 | 2023 |
| Oligonucleotide gap-fill ligation for mutation detection and sequencing in situ M Mignardi, A Mezger, X Qian, L La Fleur, J Botling, C Larsson, M Nilsson Nucleic Acids Research 43 (22), e151-e151, 2015 | 78 | 2015 |
| In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics I Grundberg, S Kiflemariam, M Mignardi, J Imgenberg-Kreuz, K Edlund, ... Oncotarget 4 (12), 2407, 2013 | 57 | 2013 |
| Analyte capture from an embedded biological sample M Mignardi US Patent App. 17/881,086, 2023 | 56 | 2023 |
| Fourth-generation sequencing in the cell and the clinic M Mignardi, M Nilsson Genome medicine 6, 1-4, 2014 | 41 | 2014 |
| RollFISH achieves robust quantification of single-molecule RNA biomarkers in paraffin-embedded tumor tissue samples C Wu, M Simonetti, C Rossell, M Mignardi, R Mirzazadeh, L Annaratone, ... Communications biology 1 (1), 209, 2018 | 36 | 2018 |
| Spatial analysis to detect sequence variants C Galonska, M Mignardi US Patent 11,959,130, 2024 | 35 | 2024 |
| Regeneration-associated WNT signaling is activated in long-term reconstituting AC133bright acute myeloid leukemia cells A Beghini, F Corlazzoli, L Del Giacco, M Re, F Lazzaroni, M Brioschi, ... Neoplasia 14 (12), 1236-IN45, 2012 | 34 | 2012 |
| In situ sequencing identifies TMPRSS2–ERG fusion transcripts, somatic point mutations and gene expression levels in prostate cancers S Kiflemariam, M Mignardi, MA Ali, A Bergh, M Nilsson, T Sjöblom The Journal of pathology 234 (2), 253-261, 2014 | 22 | 2014 |
| New technologies for DNA analysis–a review of the READNA Project S McGinn, D Bauer, T Brefort, L Dong, A El-Sagheer, A Elsharawy, ... New biotechnology 33 (3), 311-330, 2016 | 19 | 2016 |
| Bridging histology and bioinformatics—computational analysis of spatially resolved transcriptomics M Mignardi, O Ishaq, X Qian, C Wählby Proceedings of the IEEE 105 (3), 530-541, 2016 | 14 | 2016 |
| Methods for spatial analysis using rolling circle amplification M Mignardi US Patent App. 18/032,948, 2024 | 12 | 2024 |
| Modeling spatial correlation of transcripts with application to developing pancreas R Liu, M Mignardi, R Jones, M Enge, SK Kim, SR Quake, J Zou Scientific reports 9 (1), 5592, 2019 | 11 | 2019 |
