Panagiotis Alexiou
Panagiotis Alexiou
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Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer
L Zhang, S Volinia, T Bonome, GA Calin, J Greshock, N Yang, CG Liu, ...
Proceedings of the National Academy of Sciences 105 (19), 7004, 2008
DIANA-microT web server: elucidating microRNA functions through target prediction
M Maragkakis, M Reczko, VA Simossis, P Alexiou, GL Papadopoulos, ...
Nucleic acids research 37 (suppl_2), W273-W276, 2009
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support
T Vergoulis, IS Vlachos, P Alexiou, G Georgakilas, M Maragkakis, ...
Nucleic acids research 40 (D1), D222-D229, 2012
Functional microRNA targets in protein coding sequences
M Reczko, M Maragkakis, P Alexiou, I Grosse, AG Hatzigeorgiou
Bioinformatics 28 (6), 771-776, 2012
Accurate microRNA target prediction correlates with protein repression levels
M Maragkakis, P Alexiou, GL Papadopoulos, M Reczko, T Dalamagas, ...
BMC bioinformatics 10, 1-10, 2009
Lost in translation: an assessment and perspective for computational microRNA target identification
P Alexiou, M Maragkakis, GL Papadopoulos, M Reczko, ...
Bioinformatics 25 (23), 3049-3055, 2009
DIANA-mirPath: Integrating human and mouse microRNAs in pathways
GL Papadopoulos, P Alexiou, M Maragkakis, M Reczko, ...
Bioinformatics 25 (15), 1991-1993, 2009
Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis
A Vourekas, Q Zheng, P Alexiou, M Maragkakis, Y Kirino, BD Gregory, ...
Nature structural & molecular biology 19 (8), 773-781, 2012
miRGen 2.0: a database of microRNA genomic information and regulation
P Alexiou, T Vergoulis, M Gleditzsch, G Prekas, T Dalamagas, M Megraw, ...
Nucleic acids research 38 (suppl_1), D137-D141, 2010
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association
M Maragkakis, T Vergoulis, P Alexiou, M Reczko, K Plomaritou, M Gousis, ...
Nucleic acids research 39 (suppl_2), W145-W148, 2011
The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processing
A Vourekas, K Zheng, Q Fu, M Maragkakis, P Alexiou, J Ma, RS Pillai, ...
Genes & development 29 (6), 617-629, 2015
FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns
T Nakaya, P Alexiou, M Maragkakis, A Chang, Z Mourelatos
Rna 19 (4), 498-509, 2013
Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasm
A Vourekas, P Alexiou, N Vrettos, M Maragkakis, Z Mourelatos
Nature 531 (7594), 390-394, 2016
A MicroRNA precursor surveillance system in quality control of MicroRNA synthesis
X Liu, Q Zheng, N Vrettos, M Maragkakis, P Alexiou, BD Gregory, ...
Molecular cell 55 (6), 868-879, 2014
The DIANA-mirExTra web server: from gene expression data to microRNA function
P Alexiou, M Maragkakis, GL Papadopoulos, VA Simmosis, L Zhang, ...
PloS one 5 (2), e9171, 2010
Mitochondrial protein BmPAPI modulates the length of mature piRNAs
S Honda, Y Kirino, M Maragkakis, P Alexiou, A Ohtaki, R Murali, ...
Rna 19 (10), 1405-1418, 2013
Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysis
F Ibrahim, M Maragkakis, P Alexiou, Z Mourelatos
Nature structural & molecular biology 25 (4), 302-310, 2018
In Vivo Profiling of Hypoxic Gene Expression in Gliomas Using the Hypoxia Marker EF5 and Laser-capture Microdissection
D Marotta, J Karar, WT Jenkins, M Kumanova, KW Jenkins, JW Tobias, ...
Cancer research 71 (3), 779-789, 2011
Accurate microRNA target prediction using detailed binding site accessibility and machine learning on proteomics data
M Reczko, M Maragkakis, P Alexiou, GL Papadopoulos, ...
Frontiers in genetics 2, 103, 2012
Identification of in vivo, conserved, TAF15 RNA binding sites reveals the impact of TAF15 on the neuronal transcriptome
F Ibrahim, M Maragkakis, P Alexiou, MA Maronski, MA Dichter, ...
Cell reports 3 (2), 301-308, 2013
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