Andreas Dräger
Andreas Dräger
Junior Professor for Computational Systems Biology of Infection and Antimicrobial-Resistance
Verified email at informatik.uni-tuebingen.de - Homepage
Title
Cited by
Cited by
Year
BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
ZA King, JS Lu, A Dräger, PC Miller, S Federowicz, JA Lerman, A Ebrahim, ...
Nucleic Acids Research, 2015
4942015
BioJava: an open-source framework for bioinformatics
RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ...
Bioinformatics 24 (18), 2096-2097, 2008
2782008
Controlled vocabularies and semantics in systems biology
M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ...
Molecular systems biology 7 (1), 543, 2011
2592011
Recon3D enables a three-dimensional view of gene variation in human metabolism
E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ...
Nature biotechnology 36 (3), 272, 2018
2542018
Escher: a web application for building, sharing, and embedding data-rich visualizations of biological pathways
ZA King, A Dräger, A Ebrahim, N Sonnenschein, NE Lewis, BO Palsson
PLoS Comput Biol 11 (8), e1004321, 2015
2102015
Encyclopedia of systems biology
W Dubitzky, O Wolkenhauer, H Yokota, KH Cho
Springer Publishing Company, Incorporated, 2013
1602013
Path2Models: large-scale generation of computational models from biochemical pathway maps
F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ...
BMC systems biology 7 (1), 1-19, 2013
1352013
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ...
BMC systems biology 7 (1), 1-15, 2013
1272013
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
116*2020
JSBML: a flexible Java library for working with SBML
A Dräger, N Rodriguez, M Dumousseau, A Dörr, C Wrzodek, N Le Novère, ...
Bioinformatics 27 (15), 2167-2168, 2011
1092011
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies
A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ...
BMC Systems Biology 3 (1), 5, 2009
872009
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats
C Wrzodek, A Dräger, A Zell
Bioinformatics 27 (16), 2314-2315, 2011
772011
SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks
A Dräger, N Hassis, J Supper, A Schröder, A Zell
BMC systems biology 2 (1), 39, 2008
752008
Precise generation of systems biology models from KEGG pathways
C Wrzodek, F Büchel, M Ruff, A Dräger, A Zell
BMC systems biology 7 (1), 1-12, 2013
632013
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms
M Ostaszewski, A Mazein, ME Gillespie, I Kuperstein, A Niarakis, ...
Scientific data 7 (1), 1-4, 2020
612020
Improving collaboration by standardization efforts in systems biology
A Dräger, BØ Palsson
Frontiers in bioengineering and biotechnology 2, 61, 2014
522014
Do genome‐scale models need exact solvers or clearer standards?
A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ...
Molecular systems biology 11 (10), 831, 2015
512015
Synthetic promoters capable of driving robust nuclear gene expression in the green alga Chlamydomonas reinhardtii
MA Scranton, JT Ostrand, DR Georgianna, SM Lofgren, D Li, RC Ellis, ...
Algal research 15, 135-142, 2016
492016
ModuleMaster: A new tool to decipher transcriptional regulatory networks
C Wrzodek, A Schröder, A Dräger, D Wanke, KW Berendzen, M Kronfeld, ...
Biosystems 99 (1), 79-81, 2010
452010
BowTieBuilder: modeling signal transduction pathways
J Supper, L Spangenberg, H Planatscher, A Dräger, A Schröder, A Zell
BMC systems biology 3 (1), 1-13, 2009
432009
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Articles 1–20