Luis M. Rodriguez-R
Luis M. Rodriguez-R
Enve-omics / Kostas lab, Georgia Institute of Technology, Atlanta, GA, USA
Verified email at gatech.edu - Homepage
TitleCited byYear
Microbiome of the upper troposphere: species composition and prevalence, effects of tropical storms, and atmospheric implications
N DeLeon-Rodriguez, TL Lathem, LM Rodriguez-R, JM Barazesh, ...
Proceedings of the National Academy of Sciences 110 (7), 2575-2580, 2013
2852013
The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes
LM Rodriguez-R, KT Konstantinidis
PeerJ Preprints, 2016
2682016
Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics
R Poretsky, LM Rodriguez-R, C Luo, D Tsementzi, KT Konstantinidis
PloS one 9 (4), e93827, 2014
2642014
Bypassing Cultivation To Identify Bacterial Species
LM Rodriguez-R, KT Konstantinidis
Microbe 9 (3), 111-118, 2014
1782014
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
C Jain, LM Rodriguez-R, AM Phillippy, KT Konstantinidis, S Aluru
Nature communications 9 (1), 5114, 2018
1422018
MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences
C Luo, LM Rodriguez-r, KT Konstantinidis
Nucleic acids research 42 (8), e73-e73, 2014
1072014
Shifts in bacterial communities of two caribbean reef-building coral species affected by white plague disease.
A Cárdenas, LM Rodriguez-R, V Pizarro, LF Cadavid, C Arévalo-Ferro
The ISME journal, 2011
1072011
Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets
LM Rodriguez-R, KT Konstantinidis
Bioinformatics 30 (5), 629-635, 2013
1042013
Microbial community successional patterns in beach sands impacted by the Deepwater Horizon oil spill
LM Rodriguez-r, WA Overholt, C Hagan, M Huettel, JE Kostka, ...
The ISME journal 9 (9), 1928, 2015
1032015
Soil microbial community responses to a decade of warming as revealed by comparative metagenomics
C Luo, LM Rodriguez-R, ER Johnston, L Wu, L Cheng, K Xue, Q Tu, ...
Appl. Environ. Microbiol. 80 (5), 1777-1786, 2014
992014
Detecting nitrous oxide reductase (nosZ) genes in soil metagenomes: method development and implications for the nitrogen cycle
LH Orellana, LM Rodriguez-R, S Higgins, JC Chee-Sanford, RA Sanford, ...
mBio 10 (5), 01193-14, 2014
92*2014
Estimating coverage in metagenomic data sets and why it matters
LM Rodriguez-r, KT Konstantinidis
The ISME journal 8 (11), 2349, 2014
792014
An improved method for TAL effectors DNA-binding sites prediction reveals functional convergence in TAL repertoires of Xanthomonas oryzae strains
AL Pérez-Quintero, LM Rodriguez-R, A Dereeper, C López, R Koebnik, ...
PloS one 8 (7), e68464, 2013
622013
SAR11 bacteria linked to ocean anoxia and nitrogen loss
D Tsementzi, J Wu, S Deutsch, S Nath, LM Rodriguez-R, AS Burns, ...
Nature 536 (7615), 179, 2016
582016
Genomes-based phylogeny of the genus Xanthomonas
LM Rodriguez-R, A Grajales, ML Arrieta-Ortiz, C Salazar, S Restrepo, ...
BMC microbiology 12 (1), 43, 2012
562012
The Microbial Genomes Atlas (MiGA) webserver: taxonomic and gene diversity analysis of Archaea and Bacteria at the whole genome level
LM Rodriguez-R, S Gunturu, WT Harvey, R Rosselló-Mora, JM Tiedje, ...
Nucleic acids research 46 (W1), W282-W288, 2018
492018
Biofilms on hospital shower hoses: characterization and implications for nosocomial infections
MJ Soto-Giron, LM Rodriguez-R, C Luo, M Elk, H Ryu, J Hoelle, ...
Appl. Environ. Microbiol. 82 (9), 2872-2883, 2016
39*2016
Development of a variable number of tandem repeats typing scheme for the bacterial rice pathogen Xanthomonas oryzae pv. oryzicola
S Zhao, L Poulin, LM Rodriguez-R, NF Serna, SY Liu, I Wonni, B Szurek, ...
Phytopathology 102 (10), 948-956, 2012
342012
Metagenomics reveals pervasive bacterial populations and reduced community diversity across the Alaska tundra ecosystem
ER Johnston, LM Rodriguez-R, C Luo, MM Yuan, L Wu, Z He, ...
Frontiers in microbiology 7, 579, 2016
332016
New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by …
L Poulin, P Grygiel, M Magne, L Gagnevin, LM Rodriguez-R, NF Serna, ...
Appl. Environ. Microbiol. 81 (2), 688-698, 2015
322015
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Articles 1–20