| RDP4: Detection and analysis of recombination patterns in virus genomes DP Martin, B Murrell, M Golden, A Khoosal, B Muhire Virus evolution 1 (1), vev003, 2015 | 3120 | 2015 |
| Detecting individual sites subject to episodic diversifying selection B Murrell, JO Wertheim, S Moola, T Weighill, K Scheffler, ... PLoS genetics 8 (7), e1002764, 2012 | 1677 | 2012 |
| FUBAR: a fast, unconstrained bayesian approximation for inferring selection B Murrell, S Moola, A Mabona, T Weighill, D Sheward, ... Molecular biology and evolution 30 (5), 1196-1205, 2013 | 1232 | 2013 |
| Less is more: an adaptive branch-site random effects model for efficient detection of episodic diversifying selection MD Smith, JO Wertheim, S Weaver, B Murrell, K Scheffler, ... Molecular biology and evolution 32 (5), 1342-1353, 2015 | 698 | 2015 |
| RELAX: detecting relaxed selection in a phylogenetic framework JO Wertheim, B Murrell, MD Smith, SL Kosakovsky Pond, K Scheffler Molecular biology and evolution 32 (3), 820-832, 2015 | 632* | 2015 |
| Gene-wide identification of episodic selection B Murrell, S Weaver, MD Smith, JO Wertheim, S Murrell, A Aylward, ... Molecular biology and evolution 32 (5), 1365-1371, 2015 | 550 | 2015 |
| Antibody 10-1074 suppresses viremia in HIV-1-infected individuals M Caskey, T Schoofs, H Gruell, A Settler, T Karagounis, EF Kreider, ... Nature medicine 23 (2), 185-191, 2017 | 487 | 2017 |
| A random effects branch-site model for detecting episodic diversifying selection SL Kosakovsky Pond, B Murrell, M Fourment, SDW Frost, W Delport, ... Molecular biology and evolution 28 (11), 3033-3043, 2011 | 473 | 2011 |
| HyPhy 2.5—a customizable platform for evolutionary hypothesis testing using phylogenies SL Kosakovsky Pond, AFY Poon, R Velazquez, S Weaver, NL Hepler, ... Molecular biology and evolution 37 (1), 295-299, 2020 | 446 | 2020 |
| RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets DP Martin, A Varsani, P Roumagnac, G Botha, S Maslamoney, T Schwab, ... Virus Evolution 7 (1), veaa087, 2021 | 408 | 2021 |
| Slow delivery immunization enhances HIV neutralizing antibody and germinal center responses via modulation of immunodominance KM Cirelli, DG Carnathan, B Nogal, JT Martin, OL Rodriguez, ... Cell 177 (5), 1153-1171. e28, 2019 | 345 | 2019 |
| SARS-CoV-2 exposure, symptoms and seroprevalence in healthcare workers in Sweden AS Rudberg, S Havervall, A Månberg, A Jernbom Falk, K Aguilera, H Ng, ... Nature communications 11 (1), 5064, 2020 | 344 | 2020 |
| An alpaca nanobody neutralizes SARS-CoV-2 by blocking receptor interaction L Hanke, L Vidakovics Perez, DJ Sheward, H Das, T Schulte, ... Nature communications 11 (1), 4420, 2020 | 322 | 2020 |
| Broadly neutralizing antibody responses in a large longitudinal sub-Saharan HIV primary infection cohort E Landais, X Huang, C Havenar-Daughton, B Murrell, MA Price, ... PLoS pathogens 12 (1), e1005369, 2016 | 286 | 2016 |
| The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages DP Martin, S Weaver, H Tegally, JE San, SD Shank, E Wilkinson, ... Cell 184 (20), 5189-5200. e7, 2021 | 271 | 2021 |
| Social and genetic networks of HIV-1 transmission in New York City JO Wertheim, SL Kosakovsky Pond, LA Forgione, SR Mehta, B Murrell, ... PLoS pathogens 13 (1), e1006000, 2017 | 202 | 2017 |
| Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2 TF Custódio, H Das, DJ Sheward, L Hanke, S Pazicky, J Pieprzyk, ... Nature communications 11 (1), 5588, 2020 | 159 | 2020 |
| Vaccine-induced protection from homologous tier 2 SHIV challenge in nonhuman primates depends on serum-neutralizing antibody titers MG Pauthner, JP Nkolola, C Havenar-Daughton, B Murrell, SM Reiss, ... Immunity 50 (1), 241-252. e6, 2019 | 150 | 2019 |
| Early antibody lineage diversification and independent limb maturation lead to broad HIV-1 neutralization targeting the Env high-mannose patch DT MacLeod, NM Choi, B Briney, F Garces, LS Ver, E Landais, B Murrell, ... Immunity 44 (5), 1215-1226, 2016 | 139 | 2016 |
| Detecting and analyzing genetic recombination using RDP4 DP Martin, B Murrell, A Khoosal, B Muhire Bioinformatics: Volume I: data, sequence analysis, and evolution, 433-460, 2017 | 127 | 2017 |
Daniel ShewardKarolinska InstitutetVerified email at ki.se
