Melissa Haendel
Melissa Haendel
Oregon State University & OHSU
Verified email at tislab.org
Title
Cited by
Cited by
Year
The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data
S Köhler, SC Doelken, CJ Mungall, S Bauer, HV Firth, I Bailleul-Forestier, ...
Nucleic acids research 42 (D1), D966-D974, 2014
7322014
The human phenotype ontology in 2017
S Köhler, NA Vasilevsky, M Engelstad, E Foster, J McMurry, S Aymé, ...
Nucleic acids research 45 (D1), D865-D876, 2017
5312017
Uberon, an integrative multi-species anatomy ontology
CJ Mungall, C Torniai, GV Gkoutos, SE Lewis, MA Haendel
Genome biology 13 (1), 1-20, 2012
4512012
OBO-Edit—an ontology editor for biologists
J Day-Richter, MA Harris, M Haendel, ...
Bioinformatics 23 (16), 2198-2200, 2007
3142007
DSCAM: a novel member of the immunoglobulin superfamily maps in a Down syndrome region and is involved in the development of the nervous system
K Yamakawa, YK Huo, MA Haendel, R Hubert, XN Chen, GE Lyons, ...
Human molecular genetics 7 (2), 227-237, 1998
3021998
The Zebrafish Information Network: the zebrafish model organism database
J Sprague, L Bayraktaroglu, D Clements, T Conlin, D Fashena, K Frazer, ...
Nucleic acids research 34 (suppl_1), D581-D585, 2006
2912006
Integrating phenotype ontologies across multiple species
CJ Mungall, GV Gkoutos, CL Smith, MA Haendel, SE Lewis, M Ashburner
Genome biology 11 (1), 1-16, 2010
2902010
The Matchmaker Exchange: a platform for rare disease gene discovery
AA Philippakis, DR Azzariti, S Beltran, AJ Brookes, CA Brownstein, ...
Human mutation 36 (10), 915-921, 2015
2822015
Linking human diseases to animal models using ontology-based phenotype annotation
NL Washington, MA Haendel, CJ Mungall, M Ashburner, M Westerfield, ...
PLoS Biol 7 (11), e1000247, 2009
2772009
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ...
Nucleic acids research 47 (D1), D1018-D1027, 2019
2742019
Improved exome prioritization of disease genes through cross-species phenotype comparison
PN Robinson, S Köhler, A Oellrich, K Wang, CJ Mungall, SE Lewis, ...
Genome research 24 (2), 340-348, 2014
2492014
On the reproducibility of science: unique identification of research resources in the biomedical literature
NA Vasilevsky, MH Brush, H Paddock, L Ponting, SJ Tripathy, ...
PeerJ 1, e148, 2013
2122013
Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome
T Zemojtel, S Köhler, L Mackenroth, M Jäger, J Hecht, P Krawitz, ...
Science translational medicine 6 (252), 252ra123-252ra123, 2014
1962014
The ontology for biomedical investigations
A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ...
PloS one 11 (4), e0154556, 2016
1862016
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS Biol 13 (1), e1002033, 2015
1732015
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species
CJ Mungall, JA McMurry, S Köhler, JP Balhoff, C Borromeo, M Brush, ...
Nucleic acids research 45 (D1), D712-D722, 2017
1692017
Next-generation diagnostics and disease-gene discovery with the Exomiser
D Smedley, JOB Jacobsen, M Jäger, S Köhler, M Holtgrewe, M Schubach, ...
Nature protocols 10 (12), 2004-2015, 2015
1572015
The human phenotype ontology: semantic unification of common and rare disease
T Groza, S Köhler, D Moldenhauer, N Vasilevsky, G Baynam, T Zemojtel, ...
The American Journal of Human Genetics 97 (1), 111-124, 2015
1552015
The Zebrafish Information Network: the zebrafish model organism database provides expanded support for genotypes and phenotypes
J Sprague, L Bayraktaroglu, Y Bradford, T Conlin, N Dunn, D Fashena, ...
Nucleic acids research 36 (suppl_1), D768-D772, 2007
1512007
A whole-genome analysis framework for effective identification of pathogenic regulatory variants in Mendelian disease
D Smedley, M Schubach, JOB Jacobsen, S Köhler, T Zemojtel, ...
The American Journal of Human Genetics 99 (3), 595-606, 2016
1442016
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Articles 1–20