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Heng Li
Heng Li
Dana-Farber Cancer Institute & Harvard University
Verified email at jimmy.harvard.edu - Homepage
Title
Cited by
Cited by
Year
The sequence alignment/map format and SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
bioinformatics 25 (16), 2078-2079, 2009
584222009
Fast and accurate short read alignment with Burrows–Wheeler transform
H Li, R Durbin
Bioinformatics 25 (14), 1754-1760, 2009
479842009
A global reference for human genetic variation
GP Consortium
Nature 526 (7571), 68-74, 2015
16194*2015
Fast and accurate long-read alignment with Burrows–Wheeler transform
H Li, R Durbin
Bioinformatics 26 (5), 589-595, 2010
123982010
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
H Li
arXiv preprint arXiv:1303.3997, 2013
113842013
Minimap2: pairwise alignment for nucleotide sequences
H Li
Bioinformatics 34 (18), 3094-3100, 2018
100382018
A map of human genome variation from population-scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061-1073, 2010
89242010
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56-65, 2012
85432012
Twelve years of SAMtools and BCFtools
P Danecek, JK Bonfield, J Liddle, J Marshall, V Ohan, MO Pollard, ...
GigaScience 10 (2), giab008, 2021
7703*2021
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
H Li
Bioinformatics 27 (21), 2987-2993, 2011
63522011
Accurate whole human genome sequencing using reversible terminator chemistry
DR Bentley, S Balasubramanian, HP Swerdlow, GP Smith, J Milton, ...
nature 456 (7218), 53-59, 2008
52042008
A draft sequence of the Neandertal genome
RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ...
science 328 (5979), 710-722, 2010
51572010
Mapping short DNA sequencing reads and calling variants using mapping quality scores
H Li, J Ruan, R Durbin
Genome research 18 (11), 1851-1858, 2008
35462008
Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm
H Cheng, GT Concepcion, X Feng, H Zhang, H Li
Nature methods 18 (2), 170-175, 2021
30912021
Inference of human population history from individual whole-genome sequences
H Li, R Durbin
Nature 475 (7357), 493-496, 2011
25232011
The complete genome sequence of a Neanderthal from the Altai Mountains
K Prüfer, F Racimo, N Patterson, F Jay, S Sankararaman, S Sawyer, ...
Nature 505 (7481), 43-49, 2014
24772014
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
24082022
Genetic history of an archaic hominin group from Denisova Cave in Siberia
D Reich, RE Green, M Kircher, J Krause, N Patterson, EY Durand, B Viola, ...
Nature 468 (7327), 1053-1060, 2010
23472010
A high-coverage genome sequence from an archaic Denisovan individual
M Meyer, M Kircher, MT Gansauge, H Li, F Racimo, S Mallick, ...
Science 338 (6104), 222-226, 2012
22422012
Efficient architecture-aware acceleration of BWA-MEM for multicore systems
M Vasimuddin, S Misra, H Li, S Aluru
2019 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2019
16362019
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Articles 1–20