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Claudia Solís-Lemus
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Year
Inferring phylogenetic networks with maximum pseudolikelihood under incomplete lineage sorting
C Solís-Lemus, C Ané
PLoS Genet: e1005896, doi:10.1371/journal.pgen.1005896 12 (3), 2015
3902015
PhyloNetworks: a package for phylogenetic networks
C Solís-Lemus, P Bastide, C Ané
Molecular biology and evolution 34 (12), 3292-3298, 2017
2892017
Bayesian species delimitation combining multiple genes and traits in a unified framework
C Solís-Lemus, LL Knowles, C Ané
Evolution 69 (2), 492-507, 2015
1912015
Inconsistency of species tree methods under gene flow
C Solís-Lemus, M Yang, C Ané
Systematic biology 65 (5), 843-851, 2016
1562016
Phylogenetic comparative methods on phylogenetic networks with reticulations
P Bastide, C Solís-Lemus, R Kriebel, K William Sparks, C Ané
Systematic biology 67 (5), 800-820, 2018
902018
Genes influencing phage host range in Staphylococcus aureus on a species-wide scale
AG Moller, K Winston, S Ji, J Wang, MN Hargita Davis, CR Solís-Lemus, ...
Msphere 6 (1), 10.1128/msphere. 01263-20, 2021
212021
Greatly reduced phylogenetic structure in the cultivated potato clade (Solanum section Petota pro parte)
DM Spooner, H Ruess, CI Arbizu, F Rodríguez, C Solís‐Lemus
American Journal of Botany 105 (1), 60-70, 2018
192018
Adversarial Principal Component Analysis
D Pimentel-Alarcón, A Biswas, C Solís-Lemus
IEEE International Symposium on Information Theory, 2017
152017
Genomic analysis of variability in Delta-toxin levels between Staphylococcus aureus strains
M Su, JT Lyles, RA Petit III, J Peterson, M Hargita, H Tang, C Solis-Lemus, ...
PeerJ 8, e8717, 2020
132020
Statistical evidence for common ancestry: Application to primates
DA Baum, C Ané, B Larget, C Solís-Lemus, LST Ho, P Boone, ...
Evolution 70 (6), 1354-1363, 2016
122016
Classification of animal sounds in a hyperdiverse rainforest using convolutional neural networks with data augmentation
Y Sun, TM Maeda, C Solís-Lemus, D Pimentel-Alarcón, Z Buřivalová
Ecological Indicators 145, 109621, 2022
11*2022
Phasing alleles improves network inference with allopolyploids
GP Tiley, AA Crowl, PS Manos, EB Sessa, C Solís-Lemus, AD Yoder, ...
BioRxiv, 2021
102021
Effect of genetic background on the evolution of Vancomycin-Intermediate Staphylococcus aureus (VISA)
M Su, MH Davis, J Peterson, C Solis-Lemus, SW Satola, TD Read
PeerJ 9, e11764, 2021
82021
On the identifiability of phylogenetic networks under a pseudolikelihood model
C Solis-Lemus, A Coen, C Ane
arXiv preprint arXiv:2010.01758, 2020
72020
Accurate phylogenetic inference with a symmetry-preserving neural network model
C Solis-Lemus, S Yang, L Zepeda-Nunez
arXiv preprint arXiv:2201.04663, 2022
62022
SiPhyNetwork: An R package for simulating phylogenetic networks
JA Justison, C Solis‐Lemus, TA Heath
Methods in Ecology and Evolution 14 (7), 1687-1698, 2023
52023
Machine learning identification of Pseudomonas aeruginosa strains from colony image data
JB Rattray, RJ Lowhorn, R Walden, P Márquez-Zacarías, E Molotkova, ...
PLoS Computational Biology 19 (12), e1011699, 2023
32023
Detectability of varied hybridization scenarios using genome-scale hybrid detection methods
M Bjorner, EK Molloy, CN Dewey, C Solis-Lemus
arXiv preprint arXiv:2211.00712, 2022
32022
Efficient estimation of indirect effects in case‐control studies using a unified likelihood framework
GA Satten, SW Curtis, C Solis‐Lemus, EJ Leslie, MP Epstein
Statistics in medicine 41 (15), 2879-2893, 2022
32022
Bayesian conditional auto-regressive lasso models to learn sparse biological networks with predictors
Y Shen, C Solis-Lemus
arXiv preprint arXiv:2012.08397, 2021
32021
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Articles 1–20