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Samuel Mark Thompson
Samuel Mark Thompson
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
A fluorophore ligase for site-specific protein labeling inside living cells
C Uttamapinant, KA White, H Baruah, S Thompson, M Fernández-Suárez, ...
Proceedings of the National Academy of Sciences 107 (24), 10914-10919, 2010
3472010
Flex ddG: Rosetta ensemble-based estimation of changes in protein–protein binding affinity upon mutation
KA Barlow, S Ó Conchúir, S Thompson, P Suresh, JE Lucas, M Heinonen, ...
The Journal of Physical Chemistry B 122 (21), 5389-5399, 2018
1892018
Yeast display evolution of a kinetically efficient 13-amino acid substrate for lipoic acid ligase
S Puthenveetil, DS Liu, KA White, S Thompson, AY Ting
Journal of the American Chemical Society 131 (45), 16430-16438, 2009
1192009
Determination of ubiquitin fitness landscapes under different chemical stresses in a classroom setting
D Mavor, K Barlow, S Thompson, BA Barad, AR Bonny, CL Cario, ...
Elife 5, e15802, 2016
782016
Photonic hydrogels with poly (ethylene glycol) derivative colloidal spheres as building blocks
T Cai, G Wang, S Thompson, M Marquez, Z Hu
Macromolecules 41 (24), 9508-9512, 2008
722008
Conformational freedom of the LRP6 ectodomain is regulated by N-glycosylation and the binding of the Wnt antagonist Dkk1
K Matoba, E Mihara, K Tamura-Kawakami, N Miyazaki, S Maeda, H Hirai, ...
Cell reports 18 (1), 32-40, 2017
592017
Allosteric inhibition of human ribonucleotide reductase by dATP entails the stabilization of a hexamer
N Ando, H Li, EJ Brignole, S Thompson, MI McLaughlin, JE Page, ...
Biochemistry 55 (2), 373-381, 2016
482016
Structure-guided engineering of a Pacific Blue fluorophore ligase for specific protein imaging in living cells
JD Cohen, S Thompson, AY Ting
Biochemistry 50 (38), 8221-8225, 2011
482011
Altered expression of a quality control protease in E. coli reshapes the in vivo mutational landscape of a model enzyme
S Thompson, Y Zhang, C Ingle, KA Reynolds, T Kortemme
Elife 9, e53476, 2020
402020
Structurally distributed surface sites tune allosteric regulation
JW McCormick, MAX Russo, S Thompson, A Blevins, KA Reynolds
elife 10, e68346, 2021
262021
Fundamentals to function: Quantitative and scalable approaches for measuring protein stability
B Atsavapranee, CD Stark, F Sunden, S Thompson, PM Fordyce
Cell systems 12 (6), 547-560, 2021
132021
Negative-stain electron microscopy reveals dramatic structural rearrangements in Ni-Fe-S-dependent carbon monoxide dehydrogenase/acetyl-CoA synthase
SE Cohen, EJ Brignole, EC Wittenborn, M Can, S Thompson, ...
Structure 29 (1), 43-49. e3, 2021
132021
Antibacterial potency of type VI amidase effector toxins is dependent on substrate topology and cellular context
A Radkov, AL Sapiro, S Flores, C Henderson, H Saunders, R Kim, ...
Elife 11, e79796, 2022
62022
The genetic landscape of a metabolic interaction
TN Nguyen, C Ingle, S Thompson, KA Reynolds
Nature Communications 15 (1), 3351, 2024
32024
Modulating the cellular context broadly reshapes the mutational landscape of a model enzyme
S Thompson, Y Zhang, C Ingle, KA Reynolds, T Kortemme
bioRxiv, 848010, 2019
22019
Why you need an agenda for meetings with your principal investigator
T Veuthey, S Thompson
Nature 561 (7722), 277-278, 2018
12018
Dramatic Conformational Flexibility of Carbon Monoxide Dehydrogenase/Acetyl‐CoA Synthase Revealed by Electron Microscopy
E Brignole, E Wittenborn, S Thompson, S Ragsdale, C Drennan
The FASEB Journal 29, 573.37, 2015
12015
Protein mutational tolerance is tuned by metabolic environment
T Nguyen, C Ingle, S Thompson, KA Reynolds
Biophysical Journal 123 (3), 356a, 2024
2024
FACS-Sortable Picoreactors for Ultra High-throughput Screening of Catalysts in Biphasic Environments
S Thompson, Y Zhang, Z Yang, LA Nichols, PM Fordyce
bioRxiv, 2024.03. 01.583031, 2024
2024
Substrate topology and cognate immunity modulate antibacterial toxicity of Tae cell wall hydrolases
A Radkov, A Sapiro, S Flores, C Henderson, H Saunders, R Kim, S Massa, ...
bioRxiv, 2022
2022
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