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Title
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Cited by
Year
Illuminating protein space with a programmable generative model
JB Ingraham, M Baranov, Z Costello, KW Barber, W Wang, A Ismail, ...
Nature 623 (7989), 1070-1078, 2023
2612023
ENCoM server: exploring protein conformational space and the effect of mutations on protein function and stability
V Frappier, M Chartier, RJ Najmanovich
Nucleic acids research 43 (W1), W395-W400, 2015
1792015
A coarse-grained elastic network atom contact model and its use in the simulation of protein dynamics and the prediction of the effect of mutations
V Frappier, RJ Najmanovich
PLoS computational biology 10 (4), e1003569, 2014
1122014
Chester: A web delivered locally computed chest x-ray disease prediction system
JP Cohen, P Bertin, V Frappier
arXiv preprint arXiv:1901.11210, 2019
702019
Data-driven computational protein design
V Frappier, AE Keating
Current Opinion in Structural Biology 69, 63-69, 2021
472021
Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1
V Frappier, JM Jenson, J Zhou, G Grigoryan, AE Keating
Structure 27 (4), 606-617. e5, 2019
432019
StAR-related lipid transfer domain protein 5 binds primary bile acids [S]
D Létourneau, A Lorin, A Lefebvre, V Frappier, F Gaudreault, ...
Journal of Lipid Research 53 (12), 2677-2689, 2012
422012
PixelDB: Protein–peptide complexes annotated with structural conservation of the peptide binding mode
V Frappier, M Duran, AE Keating
Protein Science 27 (1), 276-285, 2018
302018
Vibrational entropy differences between mesophile and thermophile proteins and their use in protein engineering
V Frappier, R Najmanovich
Protein Science 24 (4), 474-483, 2015
292015
The mode of action of recombinant Mycobacterium tuberculosis shikimate kinase: kinetics and thermodynamics analyses
LA Rosado, IB Vasconcelos, MS Palma, V Frappier, RJ Najmanovich, ...
PLoS One 8 (5), e61918, 2013
252013
New structural determinants for c‐Myc specific heterodimerization with Max and development of a novel homodimeric c‐Myc b‐HLH‐LZ
ME Beaulieu, FO McDuff, V Frappier, M Montagne, JF Naud, P Lavigne
Journal of Molecular Recognition 25 (7), 414-426, 2012
212012
Mutations that allow SIR2 orthologs to function in a NAD+-depleted environment
CR Ondracek, V Frappier, AE Ringel, C Wolberger, L Guarente
Cell reports 18 (10), 2310-2319, 2017
112017
Chester: A web delivered locally computed chest X-ray disease prediction system. arXiv 2019
JP Cohen, P Bertin, V Frappier
arXiv preprint arXiv:1901.11210, 2020
102020
Applications of normal mode analysis methods in computational protein design
V Frappier, M Chartier, R Najmanovich
Computational Protein Design, 203-214, 2017
92017
Chester: a web delivered locally computed chest X-ray disease prediction system. 2019
JP Cohen, P Bertin, V Frappier
arXiv preprint arXiv:1901.11210, 1901
91901
Illuminating protein space with a programmable generative model. bioRxiv 2022
J Ingraham, M Baranov, Z Costello, KW Barber, W Wang, A Ismail, ...
CrossRef][PubMed], 2022
72022
Analysis of gene interaction graphs as prior knowledge for machine learning models
P Bertin, M Hashir, M Weiss, V Frappier, TJ Perkins, G Boucher, JP Cohen
arXiv preprint arXiv:1905.02295, 2019
52019
A web delivered locally computed chest X-ray disease prediction system
JP Cohen, P Bertin, V Frappier
Chester: A Web Delivered Locally Computed Chest X-Ray Disease Prediction System, 2019
52019
Analysis of gene interaction graphs for biasing machine learning models
P Bertin, M Hashir, M Weiss, G Boucher, V Frappier, JP Cohen
arXiv: Genomics, 2019
52019
Chester: a web delivered locally computed chest x-ray disease prediction system. arxiv
JP Cohen, P Bertin, V Frappier
51901
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