Xiaowen Feng
Xiaowen Feng
Dana-Farber Cancer Institute
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Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm
H Cheng, GT Concepcion, X Feng, H Zhang, H Li
Nature methods 18 (2), 170-175, 2021
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
The design and construction of reference pangenome graphs with minigraph
H Li, X Feng, C Chu
Genome biology 21, 1-19, 2020
Metagenome assembly of high-fidelity long reads with hifiasm-meta
X Feng, H Cheng, D Portik, H Li
Nature Methods 19 (6), 671-674, 2022
Association of germline variants in natural killer cells with tumor immune microenvironment subtypes, tumor-infiltrating lymphocytes, immunotherapy response, clinical outcomes …
X Xu, J Li, J Zou, X Feng, C Zhang, R Zheng, W Duanmu, A Saha-Mandal, ...
JAMA network open 2 (9), e199292-e199292, 2019
Germline genomic patterns are associated with cancer risk, oncogenic pathways, and clinical outcomes
X Xu, Y Zhou, X Feng, X Li, M Asad, D Li, B Liao, J Li, Q Cui, E Wang
Science advances 6 (48), eaba4905, 2020
Higher rates of processed pseudogene acquisition in humans and three great apes revealed by long-read assemblies
X Feng, H Li
Molecular Biology and Evolution 38 (7), 2958-2966, 2021
Evaluation of haplotype-aware long-read error correction with hifieval
Y Guo, X Feng, H Li
Bioinformatics 39 (10), btad631, 2023
Evaluating and improving the representation of bacterial contents in long-read metagenome assemblies
X Feng, H Li
Genome Biology 25 (1), 92, 2024
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