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Slavica Dimitrieva
Slavica Dimitrieva
Novartis Institutes for Biomedical Research (NIBR)
Verified email at novartis.com
Title
Cited by
Cited by
Year
Critical assessment of automated flow cytometry data analysis techniques
N Aghaeepour, G Finak, D Dougall, K AH, P Mah, G Obermoser, J Spidlen, ...
Nature Methods 10, 228–238, 2013
6422013
GLI1-expressing mesenchymal cells form the essential Wnt-secreting niche for colon stem cells
B Degirmenci, T Valenta, S Dimitrieva, G Hausmann, K Basler
Nature 558 (7710), 449-453, 2018
3382018
UCNEbase—a database of ultraconserved non-coding elements and genomic regulatory blocks
S Dimitrieva, P Bucher
Nucleic acids research 41 (D1), D101-D109, 2013
1172013
Transcriptional profiling of mouse peripheral nerves to the single-cell level to build a sciatic nerve ATlas (SNAT)
D Gerber, JA Pereira, J Gerber, G Tan, S Dimitrieva, E Yángüez, U Suter
Elife 10, e58591, 2021
872021
FASN-dependent lipid metabolism links neurogenic stem/progenitor cell activity to learning and memory deficits
M Bowers, T Liang, D Gonzalez-Bohorquez, S Zocher, BN Jaeger, ...
Cell stem cell 27 (1), 98-109. e11, 2020
632020
Sensitive Quantitative Proteomics of Human Hematopoietic Stem and Progenitor Cells by Data-independent Acquisition Mass Spectrometry*[S]
S Amon, F Meier-Abt, LC Gillet, S Dimitrieva, APA Theocharides, ...
Molecular & Cellular Proteomics 18 (7), 1454-1467, 2019
472019
Prognostic value of cross-omics screening for kidney clear cell renal cancer survival
S Dimitrieva, R Schlapbach, H Rehrauer
Biology direct 11, 1-15, 2016
352016
Classification of selectively constrained DNA elements using feature vectors and rule-based classifiers
D Polychronopoulos, E Weitschek, S Dimitrieva, P Bucher, G Felici, ...
Genomics 104 (2), 79-86, 2014
322014
Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements
S Dimitrieva, P Bucher
Bioinformatics 28 (18), i395-i401, 2012
262012
Unraveling patterns of site-to-site synonymous rates variation and associated gene properties of protein domains and families
S Dimitrieva, M Anisimova
PLoS One 9 (6), e95034, 2014
232014
Practicality and time complexity of a sparsified RNA folding algorithm
S Dimitrieva, P Bucher
Journal of bioinformatics and computational biology 10 (02), 1241007, 2012
132012
PANDITplus: toward better integration of evolutionary view on molecular sequences with supplementary bioinformatics resources
S Dimitrieva, M Anisimova
Trends in Evolutionary Biology 2 (1), e1, 2010
102010
Probabilistic machine learning ensures accurate ambient denoising in droplet-based single-cell omics
C Sheng, R Lopes, G Li, S Schuierer, A Waldt, R Cuttat, S Dimitrieva, ...
BioRxiv, 2022.01. 14.476312, 2022
92022
Ultra-sensitive proteome profiling of FACS-isolated cell populations by data-independent acquisition-MS: Application to human hematopoietic stem and progenitor cells
S Amon, F Meier-Abt, LC Gillet, S Dimitrieva, APA Theocharides, ...
bioRxiv, 371161, 2018
12018
Predicting metastatic transcriptomes of patient tumors with deep learning
G Li, E Béal, D Sumner, GG Galli, V Cremasco, JM Korn, F Dondelinger, ...
Cancer Research 84 (6_Supplement), 896-896, 2024
2024
Biologically relevant integration of transcriptomics profiles from cancer cell lines, patient-derived xenografts and clinical tumors using deep learning
S Dimitrieva, R Janssens, G Li, A Szalata, R Gopal, C Parmar, ...
bioRxiv, 2022.09. 07.506964, 2022
2022
The OHANA Project: Target Cancer, One Cell at a Time
D Ruddy, A Liss, V Cremasco, J Harrison, J Chang, S Dimitrieva, M Piquet, ...
PANCREAS 50 (7), 1093-1093, 2021
2021
903 SINGLE-CELL RNA SEQUENCING ANALYSIS OF PANCREATIC DUCTAL ADENOCARCINOMA REVEALS TRANSCRIPTOMIC CHANGES IN FIBROBLASTS FOLLOWING FOLFIRINOX-BASED NEOADJUVANT CHEMORADIATION …
J Harrison, JE Chang, M Piquet, S Dimitrieva, M Gabriel, KD Lillemoe, ...
Gastroenterology 160 (6), S-903, 2021
2021
797 SINGLE-CELL RNA SEQUENCING ANALYSIS OF PANCREATIC DUCTAL ADENOCARCINOMA REVEALS INTERTUMORAL TRANSCRIPTOMIC HETEROGENEITY
J Harrison, JE Chang, M Piquet, S Dimitrieva, M Gabriel, TP Hank, ...
Gastroenterology 158 (6), S-1528, 2020
2020
PF453 TRANSCRIPTOME‐PROTEOME CORRELATION IN HUMAN HEMATOPOIETIC STEM AND PROGENITOR CELLS
F Meier‐Abt, S Amon, L Gillet, W Wolski, S Dimitrieva, A Theocharides, ...
HemaSphere 3, 178, 2019
2019
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