PhenoMeNal: processing and analysis of metabolomics data in the cloud K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ... GigaScience 8 (2), giy149, 2019 | 71 | 2019 |
An atlas of genetic scores to predict multi-omic traits Y Xu, SC Ritchie, Y Liang, PRHJ Timmers, M Pietzner, L Lannelongue, ... Nature 616 (7955), 123-131, 2023 | 34 | 2023 |
Cancer cell metabolism as new targets for novel designed therapies IM De Mas, E Aguilar, A Jayaraman, IH Polat, A Martín-Bernabé, R Bharat, ... Future medicinal chemistry 6 (16), 1791-1810, 2014 | 33 | 2014 |
Interoperable and scalable data analysis with microservices: applications in metabolomics P Emami Khoonsari, P Moreno, S Bergmann, J Burman, M Capuccini, ... Bioinformatics 35 (19), 3752-3760, 2019 | 29 | 2019 |
The landscape of tiered regulation of breast cancer cell metabolism R Katzir, IH Polat, M Harel, S Katz, C Foguet, VA Selivanov, P Sabatier, ... Scientific reports 9 (1), 17760, 2019 | 25 | 2019 |
HepatoDyn: A Dynamic Model of Hepatocyte Metabolism That Integrates 13C Isotopomer Data C Foguet, S Marin, VA Selivanov, E Fanchon, WNP Lee, JJ Guinovart, ... PLoS computational biology 12 (4), e1004899, 2016 | 20 | 2016 |
Cysteine and Folate Metabolism Are Targetable Vulnerabilities of Metastatic Colorectal Cancer J Tarragó-Celada, C Foguet, M Tarrado-Castellarnau, S Marin, ... Cancers 13 (3), 425, 2021 | 16 | 2021 |
The importance of post-translational modifications in systems biology approaches to identify therapeutic targets in cancer metabolism A Martín-Bernabé, C Balcells, J Tarragó-Celada, C Foguet, ... Current Opinion in Systems Biology 3, 161-169, 2017 | 16 | 2017 |
Tracing metabolic fluxes using mass spectrometry: Stable isotope-resolved metabolomics in health and disease C Balcells, C Foguet, J Tarrago-Celada, P de Atauri, S Marin, M Cascante TrAC Trends in Analytical Chemistry 120, 115371, 2019 | 15 | 2019 |
Genome Scale Modeling to Study the Metabolic Competition between Cells in the Tumor Microenvironment I Frades, C Foguet, M Cascante, MJ Araúzo-Bravo Cancers 13 (18), 4609, 2021 | 13 | 2021 |
p13CMFA: Parsimonious 13C metabolic flux analysis C Foguet, A Jayaraman, S Marin, VA Selivanov, P Moreno, R Messeguer, ... PLoS computational biology 15 (9), e1007310, 2019 | 13 | 2019 |
Genetically personalised organ-specific metabolic models in health and disease C Foguet, Y Xu, SC Ritchie, SA Lambert, E Persyn, AP Nath, ... Nature Communications 13 (1), 7356, 2022 | 11 | 2022 |
Metabolomics in systems medicine: an overview of methods and applications E Karakitsou, C Foguet, P de Atauri, K Kultima, PE Khoonsari, ... Current Opinion in Systems Biology 15, 91-99, 2019 | 10 | 2019 |
A Phase I-II multicenter trial with Avelumab plus autologous dendritic cell vaccine in pre-treated mismatch repair-proficient (MSS) metastatic colorectal cancer patients … M Español-Rego, C Fernández-Martos, E Elez, C Foguet, L Pedrosa, ... Cancer Immunology, Immunotherapy 72 (4), 827-840, 2023 | 9 | 2023 |
Genome-scale integration of transcriptome and metabolome unveils squalene synthase and dihydrofolate reductase as targets against AML cells resistant to chemotherapy E Karakitsou, C Foguet, MGC Mostazo, N Kurrle, F Schnütgen, ... Computational and Structural Biotechnology Journal 19, 4059-4066, 2021 | 4 | 2021 |
Immunometabolic actions of trabectedin and lurbinectedin on human macrophages: relevance for their anti-tumor activity A Povo-Retana, M Fariñas, R Landauro-Vera, M Mojena, ... Frontiers in Immunology 14, 2023 | 3 | 2023 |
A novel gene signature unveils three distinct immune-metabolic rewiring patterns conserved across diverse tumor types and associated with outcomes L Pedrosa, C Foguet, H Oliveres, I Archilla, MG de Herreros, A Rodríguez, ... Frontiers in Immunology 13, 926304, 2022 | 3 | 2022 |
An assessment of quaternary structure functionality in homomer protein complexes G Abrusán, C Foguet Molecular Biology and Evolution 40 (4), msad070, 2023 | 2 | 2023 |
Integrating systemic and molecular levels to infer key drivers sustaining metabolic adaptations P de Atauri, M Tarrado-Castellarnau, J Tarragó-Celada, C Foguet, ... PLoS computational biology 17 (7), e1009234, 2021 | 2 | 2021 |
Control analysis in the identification of key enzymes driving metabolic adaptations: Towards drug target discovery P de Atauri, C Foguet, M Cascante Biosystems 231, 104984, 2023 | 1 | 2023 |