Wisdom of crowds for robust gene network inference D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ... Nature methods 9 (8), 796-804, 2012 | 1834 | 2012 |
A physical, genetic and functional sequence assembly of the barley genome. KF Mayer, R Waugh, P Langridge, TJ Close, RP Wise, A Graner, ... Nature 491, 711-716, 2012 | 1552 | 2012 |
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019 | 744 | 2019 |
The molecular landscape of colorectal cancer cell lines unveils clinically actionable kinase targets E Medico, M Russo, G Picco, C Cancelliere, E Valtorta, G Corti, ... Nature communications 6 (1), 7002, 2015 | 310 | 2015 |
Selection of suitable reference genes for accurate normalization of gene expression profile studies in non-small cell lung cancer S Saviozzi, F Cordero, ML Iacono, S Novello, SV Giorgio, RA Calogero BMC cancer 6, 1-10, 2006 | 138 | 2006 |
oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language R Sanges, F Cordero, RA Calogero Bioinformatics 23 (24), 3406-3408, 2007 | 114 | 2007 |
State‐of‐the‐art fusion‐finder algorithms sensitivity and specificity M Carrara, M Beccuti, F Lazzarato, F Cavallo, F Cordero, S Donatelli, ... BioMed research international 2013 (1), 340620, 2013 | 111 | 2013 |
Genome-wide activity of unliganded estrogen receptor-α in breast cancer cells L Caizzi, G Ferrero, S Cutrupi, F Cordero, C Ballaré, V Miano, S Reineri, ... Proceedings of the National Academy of Sciences 111 (13), 4892-4897, 2014 | 96 | 2014 |
Microarray data analysis and mining approaches F Cordero, M Botta, RA Calogero Briefings in Functional Genomics and Proteomics 6 (4), 265-281, 2007 | 90 | 2007 |
Reproducible bioinformatics project: a community for reproducible bioinformatics analysis pipelines N Kulkarni, L Alessandrì, R Panero, M Arigoni, M Olivero, G Ferrero, ... BMC bioinformatics 19, 5-13, 2018 | 79 | 2018 |
microRNA profiles in urine by next-generation sequencing can stratify bladder cancer subtypes B Pardini, F Cordero, A Naccarati, C Viberti, G Birolo, M Oderda, ... Oncotarget 9 (29), 20658, 2018 | 74 | 2018 |
State of art fusion-finder algorithms are suitable to detect transcription-induced chimeras in normal tissues? M Carrara, M Beccuti, F Cavallo, S Donatelli, F Lazzarato, F Cordero, ... BMC bioinformatics 14, 1-11, 2013 | 74 | 2013 |
Altered fecal small RNA profiles in colorectal cancer reflect gut microbiome composition in stool samples S Tarallo, G Ferrero, G Gallo, A Francavilla, G Clerico, A Realis Luc, ... Msystems 4 (5), 10.1128/msystems. 00289-19, 2019 | 66 | 2019 |
Small non-coding RNA profiling in human biofluids and surrogate tissues from healthy individuals: description of the diverse and most represented species G Ferrero, F Cordero, S Tarallo, M Arigoni, F Riccardo, G Gallo, G Ronco, ... Oncotarget 9 (3), 3097, 2018 | 65 | 2018 |
Stool microRNA profiles reflect different dietary and gut microbiome patterns in healthy individuals S Tarallo, G Ferrero, F De Filippis, A Francavilla, E Pasolli, V Panero, ... Gut 71 (7), 1302-1314, 2022 | 56 | 2022 |
Luminal long non-coding RNAs regulated by estrogen receptor alpha in a ligand-independent manner show functional roles in breast cancer V Miano, G Ferrero, S Reineri, L Caizzi, L Annaratone, L Ricci, S Cutrupi, ... Oncotarget 7 (3), 3201, 2016 | 56 | 2016 |
Mutant SOD1 and mitochondrial damage alter expression and splicing of genes controlling neuritogenesis in models of neurodegeneration SC Lenzken, V Romeo, F Zolezzi, F Cordero, G Lamorte, D Bonanno, ... Human mutation 32 (2), 168-182, 2011 | 50 | 2011 |
Inflammation and breast cancer. Inflammatory component of mammary carcinogenesis in ErbB2 transgenic mice RA Calogero, F Cordero, G Forni, F Cavallo Breast Cancer Research 9, 1-9, 2007 | 47 | 2007 |
Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ... The Plant Journal 84 (1), 216-227, 2015 | 44 | 2015 |
Integrative analysis of novel metabolic subtypes in pancreatic cancer fosters new prognostic biomarkers L Follia, G Ferrero, G Mandili, M Beccuti, D Giordano, R Spadi, MA Satolli, ... Frontiers in oncology 9, 115, 2019 | 42 | 2019 |