Vipin Sachdeva
Vipin Sachdeva
IBM Research
Verified email at gatech.edu
Title
Cited by
Cited by
Year
BioPerf: A benchmark suite to evaluate high-performance computer architecture on bioinformatics applications
DA Bader, Y Li, T Li, V Sachdeva
IEEE International. 2005 Proceedings of the IEEE Workload Characterization …, 2005
1062005
Exploring the viability of the Cell Broadband Engine for bioinformatics applications
V Sachdeva, M Kistler, E Speight, THK Tzeng
Parallel Computing 34 (11), 616-626, 2008
952008
Enabling high-performance computing as a service
M AbdelBaky, M Parashar, H Kim, KE Jordan, V Sachdeva, J Sexton, ...
Computer 45 (10), 72-80, 2012
842012
A cache-aware parallel implementation of the push-relabel network flow algorithm and experimental evaluation of the gap relabeling heuristic
DA Bader, V Sachdeva
Georgia Institute of Technology, 2006
722006
OpenRBC: A fast simulator of red blood cells at protein resolution
YH Tang, L Lu, H Li, C Evangelinos, L Grinberg, V Sachdeva, ...
Biophysical journal 112 (10), 2030-2037, 2017
332017
OpenCL for HPC with FPGAs: Case study in molecular electrostatics
C Yang, J Sheng, R Patel, A Sanaullah, V Sachdeva, MC Herbordt
2017 IEEE High Performance Extreme Computing Conference (HPEC), 1-8, 2017
232017
Fully integrated FPGA molecular dynamics simulations
C Yang, T Geng, T Wang, R Patel, Q Xiong, A Sanaullah, C Wu, J Sheng, ...
Proceedings of the International Conference for High Performance Computing …, 2019
182019
Mesh interface resolution and ghost exchange in a parallel mesh representation
TJ Tautges, JA Kraftcheck, N Bertram, V Sachdeva, J Magerlein
2012 IEEE 26th International Parallel and Distributed Processing Symposium …, 2012
172012
Molecular dynamics range-limited force evaluation optimized for FPGAs
C Yang, T Geng, T Wang, C Lin, J Sheng, V Sachdeva, W Sherman, ...
2019 IEEE 30th International Conference on Application-specific Systems …, 2019
122019
Evaluating the jaccard-tanimoto index on multi-core architectures
V Sachdeva, DM Freimuth, C Mueller
International Conference on Computational Science, 944-953, 2009
122009
K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity
CS Kim, MD Winn, V Sachdeva, KE Jordan
BMC bioinformatics 18 (1), 1-15, 2017
92017
BioS-PLASH: A sample workload for bioinformatics and computational biology for optimizing next-generation performance computer systems
D Bader, V Sachdeva, V Agarwal, G Goel, AN Singh
University of New Mexico, Tech. Rep, 2005
82005
BioSPLASH: A sample workload for bioinformatics and computational biology for optimizing next-generation high-performance computer systems
DA Bader, V Sachdeva, V Agarwal, G Goel, AN Singh
Proc. 13th Int˘l Conf. on Intel. Sys. for Mol. Bio.(ISMB 2005), 2005
62005
BioSPLASH: A sample workload for bioinformatics and computational biology for optimizing next-generation high-performance computer systems
DA Bader, V Sachdeva, V Agarwal, G Goel, AN Singh
Proc. 13th Int˘l Conf. on Intel. Sys. for Mol. Bio.(ISMB 2005), 2005
62005
Exploring HPC-based scientific software as a service using CometCloud
M AbdelBaky, J Diaz-Montes, M Johnston, V Sachdeva, RL Anderson, ...
10th IEEE international conference on collaborative computing: networking …, 2014
52014
Parallelization of the Trinity pipeline for de novo transcriptome assembly
V Sachdeva, CS Kim, KE Jordan, MD Winn
2014 IEEE International Parallel & Distributed Processing Symposium …, 2014
52014
Determination of performance characteristics of scientific applications on IBM Blue Gene/Q
C Evangelinos, RE Walkup, V Sachdeva, KE Jordan, H Gahvari, ...
IBM Journal of Research and Development 57 (1/2), 9: 1-9: 12, 2013
42013
An open benchmark suite for evaluating computer architecture on bioinformatics and life science applications
DA Bader, V Sachdeva
Georgia Institute of Technology, 2006
42006
All-to-all comparisons on architectures having limited storage space
DM Freimuth, V Sachdeva
US Patent 8,595,466, 2013
32013
Coupling a basin modeling and a seismic code using MOAB
M Yan, K Jordan, D Kaushik, M Perrone, V Sachdeva, TJ Tautges, ...
Procedia Computer Science 9, 986-993, 2012
32012
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Articles 1–20