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Yoichiro Nakatani
Yoichiro Nakatani
Verified email at cgi.med.osaka-u.ac.jp
Title
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Cited by
Year
The medaka draft genome and insights into vertebrate genome evolution
M Kasahara, K Naruse, S Sasaki, Y Nakatani, W Qu, B Ahsan, T Yamada, ...
Nature 447 (7145), 714-719, 2007
11872007
The medaka draft genome and insights into vertebrate genome evolution
M Kasahara, K Naruse, S Sasaki, Y Nakatani, W Qu, B Ahsan, T Yamada, ...
Nature 447 (7145), 714-719, 2007
11872007
The genome of a lepidopteran model insect, the silkworm Bombyx mori
International Silkworm Genome Consortium
Insect biochemistry and molecular biology 38 (12), 1036-1045, 2008
7002008
Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates
Y Nakatani, H Takeda, Y Kohara, S Morishita
Genome research 17 (9), 1254-1265, 2007
5302007
High-dimensional and large-scale phenotyping of yeast mutants
Y Ohya, J Sese, M Yukawa, F Sano, Y Nakatani, TL Saito, A Saka, ...
Proceedings of the National Academy of Sciences of the United States of …, 2005
3232005
Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites
S Sasaki, CC Mello, A Shimada, Y Nakatani, S Hashimoto, M Ogawa, ...
Science 323 (5912), 401-404, 2009
1412009
Reconstruction of proto-vertebrate, proto-cyclostome and proto-gnathostome genomes provides new insights into early vertebrate evolution
Y Nakatani, P Shingate, V Ravi, NE Pillai, A Prasad, A McLysaght, ...
Nature Communications 12 (1), 4489, 2021
962021
Comprehensive Genomic Profiling of Neuroendocrine Carcinomas of the Gastrointestinal SystemComprehensive Genomic Profiling of NECs of the Gastrointestinal System
S Yachida, Y Totoki, M Noë, Y Nakatani, M Horie, K Kawasaki, ...
Cancer discovery, OF1-OF20, 2022
702022
Genome-wide profiling of DNA methylation in human cancer cells
K Ogoshi, S Hashimoto, Y Nakatani, W Qu, K Oshima, K Tokunaga, ...
Genomics 98 (4), 280-287, 2011
692011
High-resolution analysis of the 5′-end transcriptome using a next generation DNA sequencer
S Hashimoto, W Qu, B Ahsan, K Ogoshi, A Sasaki, Y Nakatani, Y Lee, ...
PLoS One 4 (1), e4108, 2009
602009
Coordinated changes in DNA methylation in antigen-specific memory CD4 T cells
S Hashimoto, K Ogoshi, A Sasaki, J Abe, W Qu, Y Nakatani, B Ahsan, ...
The Journal of Immunology 190 (8), 4076-4091, 2013
552013
Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns
W Qu, S Hashimoto, A Shimada, Y Nakatani, K Ichikawa, TL Saito, ...
Genome research 22 (8), 1419-1425, 2012
512012
CTCF looping is established during gastrulation in medaka embryos
R Nakamura, Y Motai, M Kumagai, CL Wike, H Nishiyama, Y Nakatani, ...
Genome Research 31 (6), 968-980, 2021
412021
UTGB/medaka: genomic resource database for medaka biology
B Ahsan, D Kobayashi, T Yamada, M Kasahara, S Sasaki, TL Saito, ...
Nucleic acids research 36 (suppl_1), D747-D752, 2007
382007
Genomes as documents of evolutionary history: a probabilistic macrosynteny model for the reconstruction of ancestral genomes
Y Nakatani, A McLysaght
Bioinformatics 33 (14), i369-i378, 2017
282017
Diversity of Ca2+-induced morphology revealed by morphological phenotyping of Ca2+-sensitive mutants of Saccharomyces cerevisiae
S Ohnuki, S Nogami, H Kanai, D Hirata, Y Nakatani, S Morishita, Y Ohya
Eukaryotic cell 6 (5), 817-830, 2007
282007
Macrosynteny analysis shows the absence of ancient whole-genome duplication in lepidopteran insects
Y Nakatani, A McLysaght
Proceedings of the National Academy of Sciences 116 (6), 1816-1818, 2019
272019
Data mining tools for the Saccharomyces cerevisiae morphological database
TL Saito, J Sese, Y Nakatani, F Sano, M Yukawa, Y Ohya, S Morishita
Nucleic acids research 33 (suppl_2), W753-W757, 2005
242005
An integrative epigenomic approach identifies ELF3 as an oncogenic regulator in ASCL1‐positive neuroendocrine carcinoma
M Horie, H Tanaka, M Suzuki, Y Sato, S Takata, E Takai, N Miyashita, ...
Cancer Science 114 (6), 2596, 2023
52023
I, H. Takeda, S. Morishita, and Y. Kohara. The medaka draft genome and insights into vertebrate genome evolution
M Kasahara, K Naruse, S Sasaki, Y Nakatani, W Qu, B Ahsan, T Yamada, ...
Nature 447 (7145), 714-719, 2007
52007
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