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Bernardo J. Clavijo
Bernardo J. Clavijo
Bioinformatic Algorithms Development
Verified email at illumina.com
Title
Cited by
Cited by
Year
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
International Wheat Genome Sequencing Consortium
Science 345 (6194), 2014
13322014
Ancient hybridizations among the ancestral genomes of bread wheat
T Marcussen, SR Sandve, L Heier, M Spannagl, M Pfeifer, KS Jakobsen, ...
science 345 (6194), 2014
6072014
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ...
Genome research 27 (5), 885-896, 2017
3492017
Multiple wheat genomes reveal global variation in modern breeding
S Walkowiak, L Gao, C Monat, G Haberer, MT Kassa, J Brinton, ...
Nature 588 (7837), 277-283, 2020
2822020
KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
D Mapleson, G Garcia Accinelli, G Kettleborough, J Wright, BJ Clavijo
Bioinformatics 33 (4), 574-576, 2017
2752017
Genomic architecture and introgression shape a butterfly radiation
NB Edelman, PB Frandsen, M Miyagi, B Clavijo, J Davey, RB Dikow, ...
Science 366 (6465), 594-599, 2019
2472019
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
AV Zimin, D Puiu, R Hall, S Kingan, BJ Clavijo, SL Salzberg
Gigascience 6 (11), gix097, 2017
2412017
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
RM Leggett, BJ Clavijo, L Clissold, MD Clark, M Caccamo
Bioinformatics 30 (4), 566-568, 2014
2162014
Genome‐guided investigation of plant natural product biosynthesis
F Kellner, J Kim, BJ Clavijo, JP Hamilton, KL Childs, B Vaillancourt, ...
The Plant Journal 82 (4), 680-692, 2015
1742015
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
TC Mathers, Y Chen, G Kaithakottil, F Legeai, ST Mugford, ...
Genome biology 18 (1), 1-20, 2017
1632017
Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics
RM Leggett, RH Ramirez-Gonzalez, B Clavijo, D Waite, RP Davey
Frontiers in genetics 4, 288, 2013
1392013
Genome sequence and genetic diversity of European ash trees
ESA Sollars, AL Harper, LJ Kelly, CM Sambles, RH Ramirez-Gonzalez, ...
Nature 541 (7636), 212-216, 2017
1352017
Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data
WB Jiao, GG Accinelli, B Hartwig, C Kiefer, D Baker, E Severing, ...
Genome Research 27 (5), 778-786, 2017
1202017
The ash dieback invasion of Europe was founded by two genetically divergent individuals
M McMullan, M Rafiqi, G Kaithakottil, BJ Clavijo, L Bilham, E Orton, ...
Nature Ecology & Evolution, 1, 2018
772018
Analysis of the recombination landscape of hexaploid bread wheat reveals genes controlling recombination and gene conversion frequency
LJ Gardiner, LU Wingen, P Bailey, R Joynson, T Brabbs, J Wright, ...
Genome biology 20 (1), 69, 2019
532019
Complete genome sequence of the model rhizosphere strain Azospirillum brasilense Az39, successfully applied in agriculture
D Rivera, S Revale, R Molina, J Gualpa, M Puente, G Maroniche, G Paris, ...
Genome announcements 2 (4), e00683-14, 2014
482014
A genome assembly of the barley ‘transformation reference’cultivar Golden Promise
M Schreiber, M Mascher, J Wright, S Padmarasu, A Himmelbach, ...
G3: Genes, Genomes, Genetics 10 (6), 1823-1827, 2020
402020
Development, characterization and experimental validation of a cultivated sunflower (Helianthus annuus L.) gene expression oligonucleotide microarray
P Fernandez, M Soria, D Blesa, J DiRienzo, S Moschen, M Rivarola, ...
PloS one 7 (10), e45899, 2012
402012
Crowdsourcing genomic analyses of ash and ash dieback–power to the people
D MacLean, K Yoshida, A Edwards, L Crossman, B Clavijo, M Clark, ...
GigaScience 2 (1), 2, 2013
282013
W2RAP: a pipeline for high quality, robust assemblies of large complex genomes from short read data
B Clavijo, GG Accinelli, J Wright, D Heavens, K Barr, L Yanes, F Di Palma
bioRxiv, 110999, 2017
252017
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