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Samuel O'Donnell
Samuel O'Donnell
Sorbonne University
Verified email at upmc.fr
Title
Cited by
Cited by
Year
Reshuffling yeast chromosomes with CRISPR/Cas9
A Fleiss, S O'Donnell, T Fournier, W Lu, N Agier, S Delmas, J Schacherer, ...
PLoS Genetics 15 (8), e1008332, 2019
512019
MUM&Co: accurate detection of all SV types through whole-genome alignment
S O’Donnell, G Fischer
Bioinformatics 36 (10), 3242-3243, 2020
462020
Red to brown: an elevated anthocyanic response in apple drives ethylene to advance maturity and fruit flesh browning
RV Espley, D Leif, B Plunkett, T McGhie, R Henry-Kirk, M Hall, ...
Frontiers in Plant Science 10, 1248, 2019
442019
The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory
R Craig, S Gallaher, S Shu, P Salomé, J Jenkins, C Blaby-Haas, ...
The Plant cell 94 (3), 253-265, 2022
322022
Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae
S O’donnell, JX Yue, OA Saada, N Agier, C Caradec, T Cokelaer, ...
Nature Genetics 55 (8), 1390-1399, 2023
26*2023
Molecular profiling of beer wort fermentation diversity across natural Saccharomyces eubayanus isolates
W Mardones, CA Villarroel, K Krogerus, SM Tapia, K Urbina, CI Oporto, ...
Microbial Biotechnology 13 (4), 1012-1025, 2020
212020
Highly Contiguous Nanopore Genome Assembly of Chlamydomonas reinhardtii CC-1690
S O’Donnell, F Chaux, G Fischer
Microbiology Resource Announcements 9 (37), 2020
202020
Architecture and evolution of subtelomeres in the unicellular green alga Chlamydomonas reinhardtii
F Chaux-Jukic, S O’Donnell, RJ Craig, S Eberhard, O Vallon, Z Xu
Nucleic Acids Research 49 (13), 7571-7587, 2021
122021
Domestication of different varieties in the cheese-making fungus Geotrichum candidum
B Bennetot, JP Vernadet, V Perkins, S Hautefeuille, ...
Peer Community Journal 3, 2023
42023
Domestication in dry‐cured meat Penicillium fungi: Convergent specific phenotypes and horizontal gene transfers without strong genetic subdivision
Y Lo, J Bruxaux, RC Rodríguez de la Vega, S O'Donnell, A Snirc, M Coton, ...
Evolutionary Applications 16 (9), 1637-1660, 2023
32023
Late Pleistocene‐dated divergence between South Hemisphere populations of the non‐conventional yeast L. cidri
P Villarreal, CA Villarroel, S O'Donnell, N Agier, JF Quintero‐Galvis, ...
Environmental Microbiology 24 (12), 5615-5629, 2022
22022
Domestication signatures in the non-conventional yeast Lachancea cidri
P Villarreal, S O'Donnell, N Agier, F Muñoz-Guzman, J Benavides-Parra, ...
Msystems 9 (1), e01058-23, 2024
2024
A transient burst of mutations occurs during the normal development of yeast colonies
N Agier, N Vittorelli, F Chaux, A Gillet-Markowska, S O’Donnell, G Fischer, ...
bioRxiv, 2023.12. 11.571082, 2023
2023
A transient but very intense mutational burst occurs during the normal development of yeast colonies
N Agier, N Vittorelli, F Chaux, A Gillet-Markowska, S O'Donnell, G Fischer, ...
2023
Horizontal transfers between fungal Fusarium species contributed to successive outbreaks of coffee wilt disease
LD Peck, T Llewellyn, B Bennetot, S O'Donnell, RW Nowell, MJ Ryan, ...
bioRxiv, 2023.12. 22.572981, 2023
2023
Catologuing structural variations at the population level in Saccharomyces cerevisiae by generating a Reference genome Assembly Panel
S O'Donnell
2020
Transcriptional Regulation of the Phenylpropanoid Pathway in Malus x domestica
S O'Donnell
Masters Thesis-University of Auckland, 2016
2016
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Articles 1–17