The hornwort genome and early land plant evolution J Zhang, XX Fu, RQ Li, X Zhao, Y Liu, MH Li, A Zwaenepoel, H Ma, ... Nature plants 6 (2), 107-118, 2020 | 230 | 2020 |
wgd—simple command line tools for the analysis of ancient whole-genome duplications A Zwaenepoel, Y Van de Peer Bioinformatics 35 (12), 2153-2155, 2019 | 172 | 2019 |
Whole-genome microsynteny-based phylogeny of angiosperms T Zhao, A Zwaenepoel, JY Xue, SM Kao, Z Li, ME Schranz, Y Van de Peer Nature Communications 12 (1), 3498, 2021 | 71 | 2021 |
Inference of ancient whole-genome duplications and the evolution of gene duplication and loss rates A Zwaenepoel, Y Van de Peer Molecular biology and evolution 36 (7), 1384-1404, 2019 | 59 | 2019 |
Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis) X Wang, S Chen, X Ma, AEJ Yssel, SR Chaluvadi, MS Johnson, ... GigaScience 10 (3), giab013, 2021 | 27* | 2021 |
Finding evidence for whole genome duplications: a reappraisal A Zwaenepoel, Z Li, R Lohaus, Y Van de Peer Molecular plant 12 (2), 133-136, 2019 | 26 | 2019 |
Multi-faceted analysis provides little evidence for recurrent whole-genome duplications during hexapod evolution D Roelofs, A Zwaenepoel, T Sistermans, J Nap, AA Kampfraath, ... BMC biology 18, 1-13, 2020 | 21 | 2020 |
Revisiting ancient polyploidy in leptosporangiate ferns H Chen, Y Fang, A Zwaenepoel, S Huang, Y Van de Peer, Z Li New Phytologist 237 (4), 1405-1417, 2023 | 9 | 2023 |
Model-based detection of whole-genome duplications in a phylogeny A Zwaenepoel, Y Van de Peer Molecular biology and evolution 37 (9), 2734-2746, 2020 | 9 | 2020 |
MorphDB: prioritizing genes for specialized metabolism pathways and gene ontology categories in plants A Zwaenepoel, T Diels, D Amar, T Van Parys, R Shamir, Y Van de Peer, ... Frontiers in Plant Science 9, 352, 2018 | 9 | 2018 |
Inference of ancient polyploidy from genomic data H Chen, A Zwaenepoel Polyploidy: Methods and Protocols, 3-18, 2023 | 3 | 2023 |
Polygenic barriers to gene flow: the role of dominance, haploid selection and heterogeneous genetic architectures A Zwaenepoel, H Sachdeva, C Fraïsse bioRxiv, 2023.09. 24.559235, 2023 | 1 | 2023 |
A two-type branching process model of gene family evolution A Zwaenepoel, YV Peer bioRxiv, 2021.03. 18.435925, 2021 | 1 | 2021 |
wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication H Chen, A Zwaenepoel, Y Van de Peer Bioinformatics 40 (5), btae272, 2024 | | 2024 |
Bayesian statistical methods in evolutionary genomics A Zwaenepoel Ghent University, 2022 | | 2022 |