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Gunjan Baid
Gunjan Baid
Inductive Bio
Verified email at inductive.bio
Title
Cited by
Cited by
Year
Scaling autoregressive models for content-rich text-to-image generation
J Yu, Y Xu, JY Koh, T Luong, G Baid, Z Wang, V Vasudevan, A Ku, Y Yang, ...
arXiv preprint arXiv:2206.10789 2 (3), 5, 2022
6672022
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
3142023
Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads
K Shafin, T Pesout, PC Chang, M Nattestad, A Kolesnikov, S Goel, G Baid, ...
Nature methods 18 (11), 1322-1332, 2021
179*2021
Ultrarapid nanopore genome sequencing in a critical care setting
JE Gorzynski, SD Goenka, K Shafin, TD Jensen, DG Fisk, ME Grove, ...
New England Journal of Medicine 386 (7), 700-702, 2022
1482022
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
ND Olson, J Wagner, J McDaniel, SH Stephens, ST Westreich, ...
Cell genomics 2 (5), 2022
1152022
DeepConsensus improves the accuracy of sequences with a gap-aware sequence transformer
G Baid, DE Cook, K Shafin, T Yun, F Llinares-López, Q Berthet, ...
Nature Biotechnology 41 (2), 232-238, 2023
72*2023
Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing
SD Goenka, JE Gorzynski, K Shafin, DG Fisk, T Pesout, TD Jensen, ...
Nature Biotechnology 40 (7), 1035-1041, 2022
492022
Gaps and complex structurally variant loci in phased genome assemblies
D Porubsky, MR Vollger, WT Harvey, AN Rozanski, P Ebert, G Hickey, ...
Genome research 33 (4), 496-510, 2023
182023
DeepTrio: variant calling in families using deep learning
A Kolesnikov, S Goel, M Nattestad, T Yun, G Baid, H Yang, CY McLean, ...
bioRxiv, 2021.04. 05.438434, 2021
17*2021
An extensive sequence dataset of gold-standard samples for benchmarking and development
G Baid, M Nattestad, A Kolesnikov, S Goel, H Yang, PC Chang, A Carroll
bioRxiv, 2020.12. 11.422022, 2020
152020
Learning from data-rich problems: a case study on genetic variant calling
R Yi, PC Chang, G Baid, A Carroll
arXiv preprint arXiv:1911.05151, 2019
72019
Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome
HJ Lee, SU Greer, DS Pavlichin, B Zhou, AE Urban, T Weissman, ...
Cell Reports Methods 3 (8), 2023
22023
Using Nucleus and TensorFlow for DNA Sequencing Error Correction
G Baid, H Li, PC Chang
22019
An Attention-Based Model for Transcription Factor Binding Site Prediction
G Baid
12018
Vector-Quantized Image Modeling
YU Jiahui, X Li, H Zhang, V Vasudevan, AYS Ku, JM Baldridge, Y Xu, ...
US Patent App. 18/520,083, 2024
2024
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