Pan-cancer study detects genetic risk variants and shared genetic basis in two large cohorts SR Rashkin, RE Graff, L Kachuri, KK Thai, SE Alexeeff, MA Blatchins, ... Nature communications 11 (1), 4423, 2020 | 176 | 2020 |
Inclusion of variants discovered from diverse populations improves polygenic risk score transferability TB Cavazos, JS Witte Human Genetics and Genomics Advances 2 (1), 2021 | 95 | 2021 |
The landscape of host genetic factors involved in immune response to common viral infections L Kachuri, SS Francis, ML Morrison, GA Wendt, Y Bossé, TB Cavazos, ... Genome medicine 12, 1-18, 2020 | 65 | 2020 |
Cross-cancer evaluation of polygenic risk scores for 16 cancer types in two large cohorts RE Graff, TB Cavazos, KK Thai, L Kachuri, SR Rashkin, JD Hoffman, ... Nature communications 12 (1), 970, 2021 | 58 | 2021 |
Identification of novel susceptibility loci and genes for prostate cancer risk: a transcriptome-wide association study in over 140,000 European descendants L Wu, J Wang, Q Cai, TB Cavazos, NC Emami, J Long, XO Shu, Y Lu, ... Cancer research 79 (13), 3192-3204, 2019 | 49 | 2019 |
Decomposing oncogenic transcriptional signatures to generate maps of divergent cellular states JW Kim, OO Abudayyeh, H Yeerna, CH Yeang, M Stewart, RW Jenkins, ... Cell systems 5 (2), 105-118. e9, 2017 | 41 | 2017 |
Age-of-onset information helps identify 76 genetic variants associated with allergic disease MAR Ferreira, JM Vonk, H Baurecht, I Marenholz, C Tian, JD Hoffman, ... PLoS genetics 16 (6), e1008725, 2020 | 34 | 2020 |
A large-scale association study detects novel rare variants, risk genes, functional elements, and polygenic architecture of prostate cancer susceptibility NC Emami, TB Cavazos, SR Rashkin, CL Cario, RE Graff, CG Tai, ... Cancer research 81 (7), 1695-1703, 2021 | 14 | 2021 |
Robust sequence determinants of á-synuclein toxicity in yeast implicate membrane binding RW Newberry, T Arhar, J Costello, GC Hartoularos, AM Maxwell, ... ACS chemical biology 15 (8), 2137-2153, 2020 | 11 | 2020 |
Nurturing diversity and inclusion in AI in Biomedicine through a virtual summer program for high school students T Oskotsky, R Bajaj, J Burchard, T Cavazos, I Chen, WT Connell, S Eaneff, ... PLoS computational biology 18 (1), e1009719, 2022 | 6 | 2022 |
Assessment of genetic susceptibility to multiple primary cancers through whole-exome sequencing in two large multi-ancestry studies TB Cavazos, L Kachuri, RE Graff, JL Nierenberg, KK Thai, S Alexeeff, ... BMC medicine 20 (1), 332, 2022 | 5 | 2022 |
The landscape of host genetic factors involved in infection to common viruses and SARS-CoV-2 medRxiv L Kachuri, SS Francis, M Morrison, Y Bossé, TB Cavazos, SR Rashkin, ... Preprint. May 30 (2020), 10.1101, 2020 | 5 | 2020 |
The landscape of host genetic factors involved in immune response to common viral infections. Genome Med. 2020; 12 (1): 93 L Kachuri, SS Francis, ML Morrison, GA Wendt, Y Bosse, TB Cavazos, ... Epub 2020/10/29. 10.1186/s13073-020-00790-x, 0 | 5 | |
Beyond detection: AI-based classification of breast cancer invasiveness using cell-free orphan non-coding RNAs M Karimzadeh, TB Cavazos, NC Chen, NK Tbeileh, D Siegel, ... Cancer Research 84 (6_Supplement), 3678-3678, 2024 | | 2024 |
Deep generative AI models analyzing circulating orphan non-coding RNAs enable accurate detection of early-stage non-small cell lung cancer M Karimzadeh, A Momen-Roknabadi, TB Cavazos, Y Fang, NC Chen, ... medRxiv, 2024.04. 09.24304531, 2024 | | 2024 |
Systematic annotation of orphan RNAs reveals blood-accessible molecular barcodes of cancer identity and cancer-emergent oncogenic drivers J Wang, JM Suh, BJ Woo, A Navickas, K Garcia, K Yin, L Fish, T Cavazos, ... bioRxiv, 2024.03. 19.585748, 2024 | | 2024 |
MA19. 09 AI-Based Early Detection and Subtyping of Non-Small Cell Lung Cancer from Blood Samples Using Orphan Noncoding RNAs M Karimzadeh, TB Cavazos, J Wang, M Multhaup, Y Fang, J Ku, X Zhao, ... Journal of Thoracic Oncology 18 (11), S173, 2023 | | 2023 |
Consensus molecular subtypes and orphan non-coding RNAs in colorectal cancer. J Wang, M Karimzadeh, TB Cavazos, A Barzi, K Wang, R Hanna, ... Journal of Clinical Oncology 41 (16_suppl), e15651-e15651, 2023 | | 2023 |
Detection of early-stage cancers using circulating orphan non-coding RNAs in blood. M Karimzadeh, J Wang, TB Cavazos, LS Schwartzberg, M Multhaup, J Ku, ... Journal of Clinical Oncology 41 (16_suppl), 3051-3051, 2023 | | 2023 |
Blood-based early detection of non-small cell lung cancer using orphan noncoding RNAs M Karimzadeh, J Wang, A Sababi, OI Afolabi, DN Lam, A Huang, DR Corti, ... Cancer Research 83 (7_Supplement), 5711-5711, 2023 | | 2023 |