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Adam Midlik
Adam Midlik
Postgraduate student, Masaryk University
Verified email at mail.muni.cz
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Year
LiteMol suite: interactive web-based visualization of large-scale macromolecular structure data
D Sehnal, M Deshpande, RS Vařeková, S Mir, K Berka, A Midlik, L Pravda, ...
Nature Methods 14 (12), 1121-1122, 2017
1372017
A study on bioluminescence and photoluminescence in the earthworm Eisenia lucens
O Pes, A Midlik, J Schlaghamersky, M Zitnan, P Taborsky
Photochemical & Photobiological Sciences 15, 175-180, 2016
262016
Sanguinarine is reduced by NADH through a covalent adduct
R Sándor, J Slanina, A Midlik, K Sebrlova, L Novotná, M Carnecka, ...
Phytochemistry 145, 77-84, 2018
202018
Identification of metabolites of selected benzophenanthridine alkaloids and their toxicity evaluation
R Sandor, A Midlik, K Sebrlova, G Dovrtelova, K Noskova, J Jurica, ...
Journal of pharmaceutical and biomedical analysis 121, 174-180, 2016
152016
Uncovering of cytochrome P450 anatomy by SecStrAnnotator
A Midlik, V Navrátilová, TR Moturu, J Koča, R Svobodová, K Berka
Scientific Reports 11 (1), 12345, 2021
92021
Automated family-wide annotation of secondary structure elements
A Midlik, I Hutařová Vařeková, J Hutař, TR Moturu, V Navrátilová, J Koča, ...
Protein Supersecondary Structures: Methods and Protocols, 47-71, 2019
62019
2DProts: database of family-wide protein secondary structure diagrams
I Hutařová Vařeková, J Hutař, A Midlik, V Horský, E Hladká, R Svobodová, ...
Bioinformatics 37 (23), 4599-4601, 2021
52021
Visualization and analysis of protein structures with litemol suite
D Sehnal, R Svobodová, K Berka, L Pravda, A Midlik, J Koča
Structural Bioinformatics: Methods and Protocols, 1-13, 2020
52020
OverProt: secondary structure consensus for protein families
A Midlik, I Hutařová Vařeková, J Hutař, A Chareshneu, K Berka, ...
Bioinformatics 38 (14), 3648-3650, 2022
32022
Secondary Structure Elements-Annotations and Schematic 2D Visualizations Stable for Individual Protein Families
RS Varekova, A Midlik, IH Varekova, J Hutar, V Navratilova, J Koca, ...
Biophysical Journal 114 (3), 46a-47a, 2018
22018
LiteMol: web-based three-dimensional visualization of macromolecular structure data
MJ Conroy, D Sehnal, M Deshpande, R Svobodova, S Mir, K Berka, ...
Acta Crystallographica Section A: Foundations and Advances 73, C669-C669, 2017
12017
Real-time interactive visualisation of large macromolecular assemblies and molecular machines at atomic resolution
D Sehnal, M Deshpande, RS Varekova, S Mir, K Berka, A Midlik, L Pravda, ...
Biophysical Journal 112 (3), 178a, 2017
12017
Studium metabolismu benzofenantridinových alkaloidu
A Midlik
12016
PDBImages: a command-line tool for automated macromolecular structure visualization
A Midlik, S Nair, S Anyango, M Deshpande, D Sehnal, M Varadi, ...
Bioinformatics 39 (12), btad744, 2023
2023
Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations
A Chareshneu, A Midlik, CM Ionescu, A Rose, V Horský, A Cantara, ...
Nucleic Acids Research 51 (W1), W326-W330, 2023
2023
Discovering the general architecture of protein families with OverProt
A Midlik, I Hutařová Vařeková, J Hutař, A Chareshneu, R Svobodová, ...
ENBIK2022 conference proceedings, 7, 2022
2022
Interactive 3D Macromolecular Structure Data Mining with MolQL and Litemol Suite
D Sehnal, M Deshpande, A Rose, L Pravda, A Midlik, RS Vařeková, S Mir, ...
Biophysical Journal 114 (3), 47a, 2018
2018
Secondary Structure Elements-Annotations and Schematic 2D Visualizations Stable for Individual Protein Families
R Svobodová, A Midlik, I Hutařová Vařeková, J Hutař, V Navrátilová, ...
2018
Annotation of protein secondary structure elements for whole protein families
A Midlik, I Hutařová Vařeková, J Hutař, V Navrátilová, R Svobodová, ...
2018
Toxicita metabolitov benzo [c] fenantridinových alkaloidov
R Sándor, A Midlik, K Šebrlová, G Přibyl Dovrtělová, K Nosková, J Juřica, ...
2016
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