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Shankar Subramaniam
Shankar Subramaniam
Verified email at ucsd.edu
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Cited by
Year
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
Arabidopsis Genome Initiative genomeanalysis@ tgr. org genomeanalysis@ gsf. de
nature 408 (6814), 796-815, 2000
110482000
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
DJ Klionsky, AK Abdel-Aziz, S Abdelfatah, M Abdellatif, A Abdoli, S Abel, ...
autophagy 17 (1), 1-382, 2021
106252021
A comprehensive classification system for lipids1
E Fahy, S Subramaniam, HA Brown, CK Glass, AH Merrill, RC Murphy, ...
Journal of lipid research 46 (5), 839-861, 2005
22572005
Update of the LIPID MAPS comprehensive classification system for lipids1
E Fahy, S Subramaniam, RC Murphy, M Nishijima, CRH Raetz, T Shimizu, ...
Journal of lipid research 50, S9-S14, 2009
19132009
Lmsd: Lipid maps structure database
M Sud, E Fahy, D Cotter, A Brown, EA Dennis, CK Glass, AH Merrill Jr, ...
Nucleic acids research 35 (suppl_1), D527-D532, 2007
13152007
Lipidomics reveals a remarkable diversity of lipids in human plasma 1 [S]
O Quehenberger, AM Armando, AH Brown, SB Milne, DS Myers, ...
Journal of lipid research 51 (11), 3299-3305, 2010
12852010
LIPID MAPS online tools for lipid research
E Fahy, M Sud, D Cotter, S Subramaniam
Nucleic acids research 35 (suppl_2), W606-W612, 2007
9042007
Molecular determinants of crosstalk between nuclear receptors and toll-like receptors
S Ogawa, J Lozach, C Benner, G Pascual, RK Tangirala, S Westin, ...
Cell 122 (5), 707-721, 2005
7902005
Lipid classification, structures and tools
E Fahy, D Cotter, M Sud, S Subramaniam
Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2011
7382011
Reconstruction of cellular signalling networks and analysis of their properties
JA Papin, T Hunter, BO Palsson, S Subramaniam
Nature reviews Molecular cell biology 6 (2), 99-111, 2005
6742005
Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools
M Sud, E Fahy, D Cotter, K Azam, I Vadivelu, C Burant, A Edison, O Fiehn, ...
Nucleic acids research 44 (D1), D463-D470, 2016
6342016
Decoding cilia function: defining specialized genes required for compartmentalized cilia biogenesis
T Avidor-Reiss, AM Maer, E Koundakjian, A Polyanovsky, T Keil, ...
Cell 117 (4), 527-539, 2004
6062004
Regulated accumulation of desmosterol integrates macrophage lipid metabolism and inflammatory responses
NJ Spann, LX Garmire, JG McDonald, DS Myers, SB Milne, N Shibata, ...
Cell 151 (1), 138-152, 2012
6002012
Macrophage PPARγ is required for normal skeletal muscle and hepatic insulin sensitivity and full antidiabetic effects of thiazolidinediones
AL Hevener, JM Olefsky, D Reichart, MTA Nguyen, G Bandyopadyhay, ...
The Journal of clinical investigation 117 (6), 1658-1669, 2007
5672007
Skeletal muscle: A review of molecular structure and function, in health and disease
K Mukund, S Subramaniam
Wiley Interdisciplinary Reviews: Systems Biology and Medicine 12 (1), e1462, 2020
4952020
Incorporation of surface tension into molecular dynamics simulation of an interface: a fluid phase lipid bilayer membrane
SW Chiu, M Clark, V Balaji, S Subramaniam, HL Scott, E Jakobsson
Biophysical journal 69 (4), 1230-1245, 1995
4781995
Analytical shape computation of macromolecules: I. Molecular area and volume through alpha shape
J Liang, H Edelsbrunner, P Fu, PV Sudhakar, S Subramaniam
Proteins: Structure, Function, and Bioinformatics 33 (1), 1-17, 1998
4531998
Update on LIPID MAPS classification, nomenclature, and shorthand notation for MS-derived lipid structures
G Liebisch, E Fahy, J Aoki, EA Dennis, T Durand, CS Ejsing, M Fedorova, ...
Journal of lipid research 61 (12), 1539-1555, 2020
4352020
p62, upregulated during preneoplasia, induces hepatocellular carcinogenesis by maintaining survival of stressed HCC-initiating cells
A Umemura, F He, K Taniguchi, H Nakagawa, S Yamachika, ...
Cancer cell 29 (6), 935-948, 2016
4112016
MicroRNA-21 targets peroxisome proliferators-activated receptor-α in an autoregulatory loop to modulate flow-induced endothelial inflammation
J Zhou, KC Wang, W Wu, S Subramaniam, JYJ Shyy, JJ Chiu, JYS Li, ...
Proceedings of the National Academy of Sciences 108 (25), 10355-10360, 2011
3952011
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