Reed A. Cartwright
Reed A. Cartwright
Associate Professor of Genomics, Evolution, and Bioinformatics, Arizona State University
Verified email at - Homepage
Cited by
Cited by
A map of human genome variation from population scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
Comparative population genomics of maize domestication and improvement
MB Hufford, X Xu, J Van Heerwaarden, T Pyhäjärvi, JM Chia, ...
Nature genetics 44 (7), 808-811, 2012
Variation in genome-wide mutation rates within and between human families
DF Conrad, JEM Keebler, MA DePristo, SJ Lindsay, Y Zhang, F Casals, ...
Nature 201, 1, 2011
The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
DeNovoGear: de novo indel and point mutation discovery and phasing
A Ramu, MJ Noordam, RS Schwartz, A Wuster, ME Hurles, RA Cartwright, ...
Nature methods 10 (10), 985-987, 2013
DNA assembly with gaps (Dawg): simulating sequence evolution
RA Cartwright
Bioinformatics 21 (Suppl 3), iii31-iii38, 2005
The role of gene flow in rapid and repeated evolution of cave‐related traits in Mexican tetra, Astyanax mexicanus
A Herman, Y Brandvain, J Weagley, WR Jeffery, AC Keene, TJY Kono, ...
Molecular ecology 27 (22), 4397-4416, 2018
A community-maintained standard library of population genetic models
JR Adrion, CB Cole, N Dukler, JG Galloway, AL Gladstein, G Gower, ...
elife 9, e54967, 2020
Problems and solutions for estimating indel rates and length distributions
RA Cartwright
Molecular biology and evolution 26 (2), 473-480, 2009
Experimental evolution reveals an effective avenue to release catabolite repression via mutations in XylR
C Sievert, LM Nieves, LA Panyon, T Loeffler, C Morris, RA Cartwright, ...
Proceedings of the National Academy of Sciences 114 (28), 7349-7354, 2017
Phylogenomic reconstruction supports supercontinent origins for Leishmania
KM Harkins, RS Schwartz, RA Cartwright, AC Stone
Infection, Genetics and Evolution 38, 101-109, 2016
Whole Genome Sequencing of Field Isolates Reveals Extensive Genetic Diversity in Plasmodium vivax from Colombia
DJ Winter, MA Pacheco, AF Vallejo, RS Schwartz, M Arevalo-Herrera, ...
PLoS neglected tropical diseases 9 (12), e0004252, 2015
Logarithmic gap costs decrease alignment accuracy
R Cartwright
BMC bioinformatics 7 (1), 527, 2006
Low Base-Substitution Mutation Rate in the Germline Genome of the Ciliate Tetrahymena thermophila
H Long, DJ Winter, AYC Chang, W Sung, SH Wu, M Balboa, ...
Genome biology and evolution 8 (12), 3629-3639, 2016
A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant
AJ Orr, A Padovan, D Kainer, C Külheim, L Bromham, C Bustos-Segura, ...
Proceedings of the Royal Society B 287 (1922), 20192364, 2020
A composite genome approach to identify phylogenetically informative data from next-generation sequencing
RS Schwartz, KM Harkins, AC Stone, RA Cartwright
BMC bioinformatics 16 (1), 1-10, 2015
The importance of selection in the evolution of blindness in cavefish
RA Cartwright, RS Schwartz, AL Merry, MM Howell
BMC Evolutionary Biology 17, 1-14, 2017
The gut microbiome of exudivorous marmosets in the wild and captivity
J Malukiewicz, RA Cartwright, JA Dergam, CS Igayara, SE Kessler, ...
Scientific reports 12 (1), 5049, 2022
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Res 4: 900
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
A Toxic Mutator and Selection Alternative to the Non-Mendelian RNA Cache Hypothesis for hothead Reversion
L Comai, RA Cartwright
The Plant Cell 17 (11), 2856-2858, 2005
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