Rohan Maddamsetti
Rohan Maddamsetti
Postdoctoral Fellow, Duke University
Verified email at duke.edu
Title
Cited by
Cited by
Year
A universal RNAi-based logic evaluator that operates in mammalian cells
K Rinaudo, L Bleris, R Maddamsetti, S Subramanian, R Weiss, ...
Nature biotechnology 25 (7), 795-801, 2007
5612007
Adaptation, Clonal Interference, and Frequency-Dependent Interactions in a Long-Term Evolution Experiment with Escherichia coli
R Maddamsetti, RE Lenski, JE Barrick
Genetics 200 (2), 619-631, 2015
1392015
Sustained fitness gains and variability in fitness trajectories in the long-term evolution experiment with Escherichia coli
RE Lenski, MJ Wiser, N Ribeck, ZD Blount, JR Nahum, JJ Morris, ...
Proceedings of the Royal Society B: Biological Sciences 282 (1821), 20152292, 2015
1072015
Core Genes Evolve Rapidly in the Long-Term Evolution Experiment with Escherichia coli
R Maddamsetti, PJ Hatcher, AG Green, BL Williams, DS Marks, RE Lenski
Genome biology and evolution 9 (4), 1072-1083, 2017
392017
Genome-wide discovery of epistatic loci affecting antibiotic resistance in Neisseria gonorrhoeae using evolutionary couplings
B Schubert, R Maddamsetti, J Nyman, MR Farhat, DS Marks
Nature microbiology 4 (2), 328-338, 2019
262019
Haplotype-phased synthetic long reads from short-read sequencing
JA Stapleton, J Kim, JP Hamilton, M Wu, LC Irber, R Maddamsetti, ...
PloS one 11 (1), e0147229, 2016
262016
Phylogenomic analysis of the uracil-DNA glycosylase superfamily
JI Lucas-Lledó, R Maddamsetti, M Lynch
Molecular biology and evolution 28 (3), 1307-1317, 2011
242011
Analysis of bacterial genomes from an evolution experiment with horizontal gene transfer shows that recombination can sometimes overwhelm selection
R Maddamsetti, RE Lenski
PLoS genetics 14 (1), e1007199, 2018
192018
Synonymous Genetic Variation in Natural Isolates of Escherichia coli Does Not Predict Where Synonymous Substitutions Occur in a Long-Term Experiment
R Maddamsetti, PJ Hatcher, S Cruveiller, C Médigue, JE Barrick, ...
Molecular biology and evolution 32 (11), 2897-2904, 2015
182015
Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment
ZD Blount, R Maddamsetti, NA Grant, ST Ahmed, T Jagdish, JA Baxter, ...
Elife 9, e55414, 2020
122020
Divergent Evolution of Mutation Rates and Biases in the Long-Term Evolution Experiment with Escherichia coli
R Maddamsetti, NA Grant
Genome biology and evolution 12 (9), 1591-1603, 2020
82020
Gain‐of‐function experiments with bacteriophage lambda uncover residues under diversifying selection in nature
R Maddamsetti, DT Johnson, SJ Spielman, KL Petrie, DS Marks, ...
Evolution 72 (10), 2234-2243, 2018
82018
Maintenance of Metabolic Plasticity despite Relaxed Selection in a Long-Term Evolution Experiment with Escherichia coli
NA Grant, R Maddamsetti, RE Lenski
The American Naturalist 198 (1), 000-000, 2021
62021
A simple test to infer mode of selection in metagenomics time series of evolving asexual populations
R Maddamsetti, NA Grant
bioRxiv, 2020
52020
Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences
AG Green, H Elhabashy, KP Brock, R Maddamsetti, O Kohlbacher, ...
Nature communications 12 (1), 1-12, 2021
42021
Genome-wide discovery of epistatic loci affecting antibiotic resistance using evolutionary couplings
B Schubert, R Maddamsetti, J Nyman, MR Farhat, DS Marks
bioRxiv, 325993, 2018
42018
Proteome-scale discovery of protein interactions with residue-level resolution using sequence coevolution
AG Green, H Elhabashy, KP Brock, R Maddamsetti, O Kohlbacher, ...
bioRxiv, 791293, 2019
32019
Gene flow in microbial communities could explain unexpected patterns of synonymous variation in the Escherichia coli core genome
R Maddamsetti
Mobile genetic elements 6 (1), e1137380, 2016
32016
Universal constraints on protein evolution in the long-term evolution experiment with Escherichia coli
R Maddamsetti
bioRxiv, 2020.11. 23.394791, 2021
22021
Horizontal gene transfer may explain variation in {\theta} s
R Maddamsetti, PJ Hatcher, S Cruveiller, C Médigue, JE Barrick, ...
arXiv preprint arXiv:1210.0050, 2012
22012
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Articles 1–20