Anne Richelle
Title
Cited by
Cited by
Year
Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v. 3.0
L Heirendt, S Arreckx, T Pfau, SN Mendoza, A Richelle, A Heinken, ...
Nature protocols 14 (3), 639-702, 2019
3542019
A systematic evaluation of methods for tailoring genome-scale metabolic models
S Opdam, A Richelle, B Kellman, S Li, DC Zielinski, NE Lewis
Cell systems 4 (3), 318-329. e6, 2017
1112017
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
772020
Memote: A community driven effort towards a standardized genome-scale metabolic model test suite
C Lieven, ME Beber, BG Olivier, FT Bergmann, P Babaei, JA Bartell, ...
BioRxiv, 350991, 2018
432018
Linear robust control of S. cerevisiae fed-batch cultures at different scales
L Dewasme, A Richelle, P Dehottay, P Georges, M Remy, P Bogaerts, ...
Biochemical engineering journal 53 (1), 26-37, 2010
352010
Increasing consensus of context-specific metabolic models by integrating data-inferred cell functions
A Richelle, AWT Chiang, CC Kuo, NE Lewis
PLoS computational biology 15 (4), e1006867, 2019
262019
Improvements in protein production in mammalian cells from targeted metabolic engineering
A Richelle, NE Lewis
Current opinion in systems biology 6, 1-6, 2017
232017
Assessing key decisions for transcriptomic data integration in biochemical networks
A Richelle, C Joshi, NE Lewis
PLoS computational biology 15 (7), e1007185, 2019
212019
Modulating carbohydrate–protein interactions through glycoengineering of monoclonal antibodies to impact cancer physiology
AWT Chiang, S Li, PN Spahn, A Richelle, CC Kuo, M Samoudi, NE Lewis
Current opinion in structural biology 40, 104-111, 2016
172016
Macroscopic modelling of baker's yeast production in fed-batch cultures and its link with trehalose production
A Richelle, P Fickers, P Bogaerts
Computers & chemical engineering 61, 220-233, 2014
132014
Systematic methodology for bioprocess model identification based on generalized kinetic functions
A Richelle, P Bogaerts
Biochemical engineering journal 100, 41-49, 2015
122015
From MFA to FBA: Defining linear constraints accounting for overflow metabolism in a macroscopic FBA-based dynamical model of cell cultures in bioreactor
P Bogaerts, KM Gziri, A Richelle
Journal of Process Control 60, 34-47, 2017
102017
A methodology for building a macroscopic FBA-based dynamical simulator of cell cultures through flux variability analysis
A Richelle, KM Gziri, P Bogaerts
Biochemical engineering journal 114, 50-64, 2016
102016
Off-line optimization of baker׳ s yeast production process
A Richelle, P Bogaerts
Chemical engineering science 119, 40-52, 2014
102014
Macroscopic modelling of bioethanol production from potato peel wastes in batch cultures supplemented with inorganic nitrogen
A Richelle, IB Tahar, M Hassouna, P Bogaerts
Bioprocess and biosystems engineering 38 (9), 1819-1833, 2015
92015
StanDep: Capturing transcriptomic variability improves context-specific metabolic models
CJ Joshi, SM Schinn, A Richelle, I Shamie, EJ O’Rourke, NE Lewis
PLoS computational biology 16 (5), e1007764, 2020
72020
When Is an In Silico Representation a Digital Twin? A Biopharmaceutical Industry Approach to the Digital Twin Concept
RMC Portela, C Varsakelis, A Richelle, N Giannelos, J Pence, S Dessoy, ...
Springer, Berlin, Heidelberg, 2020
62020
Extended and Unscented Kalman Filter design for hybridoma cell fed-batch and continuous cultures.
S Fernandes, A Richelle, Z Amribt, L Dewasme, P Bogaerts, AV Wouwer
IFAC-PapersOnLine 48 (8), 1108-1113, 2015
52015
Dynamic resource allocation drives growth under nitrogen starvation in eukaryotes
JD Tibocha-Bonilla, M Kumar, A Richelle, RD Godoy-Silva, K Zengler, ...
NPJ systems biology and applications 6 (1), 1-9, 2020
42020
From MFA to FBA: Legitimating objective function and linear constraints
P Bogaerts, KM Gziri, A Richelle
IFAC-PapersOnLine 49 (7), 460-465, 2016
32016
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Articles 1–20